Information for 12-CCTTTTGAAA (Motif 17)

A G T C A G T C A G C T A C G T A C G T A C G T A C T G C G T A C G T A G T C A
Reverse Opposite:
A C G T A C G T C G A T A G T C C G T A C G T A C G T A C T G A A C T G A C T G
p-value:1e-8
log p-value:-1.892e+01
Information Content per bp:1.929
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif21.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets70.0 +/- 18.9bp
Average Position of motif in Background56.5 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:CCTTTTGAAA---
---TTTGAAACCG
 A G T C A G T C A G C T A C G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CCTTTTGAAA-
--ATTTGAATT
 A G T C A G T C A G C T A C G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCTTTTGAAA-
-CCTTTGATGT
 A G T C A G T C A G C T A C G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Rarg/MA0859.1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTTGAAA--
TTGACCTTTTGACCTT
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCTTTTGAAA-
-CCTTTGAWGT
 A G T C A G T C A G C T A C G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

Rarb/MA0857.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTTGAAA---
TGACCTTTTGACCTTT
 A C G T A C G T A C G T A G T C A G T C A G C T A C G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

HLTF/MA0109.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCTTTTGAAA
AACCTTATAT--
 A C G T A C G T A G T C A G T C A G C T A C G T A C G T A C G T A C T G C G T A C G T A G T C A
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTTGAAA----
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A G T C A G T C A G C T A C G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

TATA-Box(TBP)/Promoter/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCTTTTGAAA--
CCTTTTATAGNC
 A G T C A G T C A G C T A C G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTTGAAA-
TNCCTTTGATGT
 A C G T A G T C A G T C A G C T A C G T A C G T A C G T A C T G C G T A C G T A G T C A A C G T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T