Information for 10-CATGCGCACATGC (Motif 15)

A G T C G T C A A C G T A C T G A G T C A C T G A G T C C T G A A G T C C G T A A C G T A C T G A G T C
Reverse Opposite:
C T A G A G T C G T C A A C G T A C T G A G C T A C T G A G T C C T A G A G T C C G T A A C G T A C T G
p-value:1e-8
log p-value:-1.936e+01
Information Content per bp:1.929
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.5 +/- 24.6bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CATGCGCACATGC--
CAGATGTGCACATACGT
 A C G T A C G T A G T C G T C A A C G T A C T G A G T C A C T G A G T C C T G A A G T C C G T A A C G T A C T G A G T C A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CATGCGCACATGC--
TACATGTGCACATAAAA
 A C G T A C G T A G T C G T C A A C G T A C T G A G T C A C T G A G T C C T G A A G T C C G T A A C G T A C T G A G T C A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CATGCGCACATGC
GCGCATGCGCAC----
 A C G T A C G T A C G T A G T C G T C A A C G T A C T G A G T C A C T G A G T C C T G A A G T C C G T A A C G T A C T G A G T C
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CATGCGCACATGC
GCGCATGCGCAG----
 A C G T A C G T A C G T A G T C G T C A A C G T A C T G A G T C A C T G A G T C C T G A A G T C C G T A A C G T A C T G A G T C
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CATGCGCACATGC--
---SNGCACCTGCHS
 A G T C G T C A A C G T A C T G A G T C A C T G A G T C C T G A A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

NRF1/MA0506.1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CATGCGCACATGC--
----TGCGCAGGCGC
 A G T C G T C A A C G T A C T G A G T C A C T G A G T C C T G A A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

Myc/MA0147.2/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CATGCGCACATGC
---AAGCACATGG
 A G T C G T C A A C G T A C T G A G T C A C T G A G T C C T G A A G T C C G T A A C G T A C T G A G T C
A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CATGCGCACATGC
GGGCCGTGTGCAAAAA-
 A C G T A C G T A C G T A C G T A G T C G T C A A C G T A C T G A G T C A C T G A G T C C T G A A G T C C G T A A C G T A C T G A G T C
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CATGCGCACATGC----
NNTNCGCACCTGTNGAN
 A G T C G T C A A C G T A C T G A G T C A C T G A G T C C T G A A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CATGCGCACATGC
---NGKCACGTGM
 A G T C G T C A A C G T A C T G A G T C A C T G A G T C C T G A A G T C C G T A A C G T A C T G A G T C
A C G T A C G T A C G T T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C