Information for 3-CAGGAAATTCCAC (Motif 3)

G T A C C G T A A C T G A C T G C G T A G T C A G C T A G C A T A C G T A G T C A T G C T G C A G T A C
Reverse Opposite:
A C T G A C G T A T C G A C T G T G C A C G T A C G A T A C G T A C G T A G T C A G T C A C G T A C T G
p-value:1e-17
log p-value:-4.040e+01
Information Content per bp:1.786
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif25.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets45.4 +/- 24.1bp
Average Position of motif in Background50.6 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:CAGGAAATTCCAC
--GGAAATTCCC-
 G T A C C G T A A C T G A C T G C G T A G T C A G C T A G C A T A C G T A G T C A T G C T G C A G T A C
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.80
Offset:2
Orientation:forward strand
Alignment:CAGGAAATTCCAC
--GGAAATTCCC-
 G T A C C G T A A C T G A C T G C G T A G T C A G C T A G C A T A C G T A G T C A T G C T G C A G T A C
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:CAGGAAATTCCAC
--GGAAANCCCC-
 G T A C C G T A A C T G A C T G C G T A G T C A G C T A G C A T A C G T A G T C A T G C T G C A G T A C
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CAGGAAATTCCAC
NACAGGAAAT-----
 A C G T A C G T G T A C C G T A A C T G A C T G C G T A G T C A G C T A G C A T A C G T A G T C A T G C T G C A G T A C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CAGGAAATTCCAC
--GGAAATCCCC-
 G T A C C G T A A C T G A C T G C G T A G T C A G C T A G C A T A C G T A G T C A T G C T G C A G T A C
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CAGGAAATTCCAC
NACAGGAAAT-----
 A C G T A C G T G T A C C G T A A C T G A C T G C G T A G T C A G C T A G C A T A C G T A G T C A T G C T G C A G T A C
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CAGGAAATTCCAC
-GGGAAATCCCCN
 G T A C C G T A A C T G A C T G C G T A G T C A G C T A G C A T A C G T A G T C A T G C T G C A G T A C
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CAGGAAATTCCAC
ACAGGAAGTG----
 A C G T G T A C C G T A A C T G A C T G C G T A G T C A G C T A G C A T A C G T A G T C A T G C T G C A G T A C
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAGGAAATTCCAC
NDCAGGAARTNN---
 A C G T A C G T G T A C C G T A A C T G A C T G C G T A G T C A G C T A G C A T A C G T A G T C A T G C T G C A G T A C
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGGAAATTCCAC
ANCAGGAAGT-----
 A C G T A C G T G T A C C G T A A C T G A C T G C G T A G T C A G C T A G C A T A C G T A G T C A T G C T G C A G T A C
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T