Information for 7-CCTCCCGGAG (Motif 8)

A T G C G T A C C G A T G T A C A G T C G T A C A C T G A C T G C T G A A T C G
Reverse Opposite:
A T G C A G C T A G T C G T A C C A T G C T A G C A T G C G T A A C T G A T C G
p-value:1e-9
log p-value:-2.301e+01
Information Content per bp:1.835
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.97%
Number of Background Sequences with motif293.5
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets54.7 +/- 27.8bp
Average Position of motif in Background52.5 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CCTCCCGGAG-
-----CGGAGC
 A T G C G T A C C G A T G T A C A G T C G T A C A C T G A C T G C T G A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCTCCCGGAG---
NCCCCCCCGGGGGGN
 A C G T A C G T A T G C G T A C C G A T G T A C A G T C G T A C A C T G A C T G C T G A A T C G A C G T A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCTCCCGGAG---
ACCCCCCCGGGGGGN
 A C G T A C G T A T G C G T A C C G A T G T A C A G T C G T A C A C T G A C T G C T G A A T C G A C G T A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCCGGAG---
CCCCCCCGGGGGNN
 A C G T A T G C G T A C C G A T G T A C A G T C G T A C A C T G A C T G C T G A A T C G A C G T A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0204.1_Zfp740_2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCTCCCGGAG--
AAATTCCCCCCGGAAGT
 A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G A T G T A C A G T C G T A C A C T G A C T G C T G A A T C G A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

Gabpa/MA0062.2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTCCCGGAG
NCCACTTCCGG--
 A C G T A C G T A C G T A T G C G T A C C G A T G T A C A G T C G T A C A C T G A C T G C T G A A T C G
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCTCCCGGAG
CNGTCCTCCC----
 A C G T A C G T A C G T A C G T A T G C G T A C C G A T G T A C A G T C G T A C A C T G A C T G C T G A A T C G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTCCCGGAG
CTTCCNGGAA
 A T G C G T A C C G A T G T A C A G T C G T A C A C T G A C T G C T G A A T C G
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTCCCGGAG---
GACCCCCCGCTGTGC
 A C G T A C G T A T G C G T A C C G A T G T A C A G T C G T A C A C T G A C T G C T G A A T C G A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCTCCCGGAG
-CTTCCGGT-
 A T G C G T A C C G A T G T A C A G T C G T A C A C T G A C T G C T G A A T C G
A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T A C G T