Information for 5-MCGGGAGGAGGCGCCT (Motif 9)

T G C A A G T C A C T G C T A G A T C G G T C A A C T G A C T G T C G A A C T G A C T G A T G C A C T G G T A C A G T C A C G T
Reverse Opposite:
G T C A A C T G A C T G G T A C A T C G A G T C A G T C A C G T A G T C A G T C A C G T A T G C A G T C A G T C A C T G A C G T
p-value:1e-11
log p-value:-2.627e+01
Information Content per bp:1.812
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.7 +/- 21.5bp
Average Position of motif in Background60.7 +/- 13.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-MCGGGAGGAGGCGCCT---
GCCASCAGGGGGCGCYVNNG
 A C G T T G C A A G T C A C T G C T A G A T C G G T C A A C T G A C T G T C G A A C T G A C T G A T G C A C T G G T A C A G T C A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:MCGGGAGGAGGCGCCT
---GGGGGCGGGGC--
 T G C A A G T C A C T G C T A G A T C G G T C A A C T G A C T G T C G A A C T G A C T G A T G C A C T G G T A C A G T C A C G T
A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---MCGGGAGGAGGCGCCT
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T T G C A A G T C A C T G C T A G A T C G G T C A A C T G A C T G T C G A A C T G A C T G A T G C A C T G G T A C A G T C A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:MCGGGAGGAGGCGCCT
---GGGGGCGGGGCC-
 T G C A A G T C A C T G C T A G A T C G G T C A A C T G A C T G T C G A A C T G A C T G A T G C A C T G G T A C A G T C A C G T
A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-MCGGGAGGAGGCGCCT
GGGNGGGGGCGGGGC--
 A C G T T G C A A G T C A C T G C T A G A T C G G T C A A C T G A C T G T C G A A C T G A C T G A T G C A C T G G T A C A G T C A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:MCGGGAGGAGGCGCCT
--AGGGGGCGGGGCTG
 T G C A A G T C A C T G C T A G A T C G G T C A A C T G A C T G T C G A A C T G A C T G A T G C A C T G G T A C A G T C A C G T
A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:MCGGGAGGAGGCGCCT-
-GCGGAGGTGTCGCCTC
 T G C A A G T C A C T G C T A G A T C G G T C A A C T G A C T G T C G A A C T G A C T G A T G C A C T G G T A C A G T C A C G T A C G T
A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:MCGGGAGGAGGCGCCT
--GGGGGGGG------
 T G C A A G T C A C T G C T A G A T C G G T C A A C T G A C T G T C G A A C T G A C T G A T G C A C T G G T A C A G T C A C G T
A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:MCGGGAGGAGGCGCCT----
----TTGGGGGCGCCCCTAG
 T G C A A G T C A C T G C T A G A T C G G T C A A C T G A C T G T C G A A C T G A C T G A T G C A C T G G T A C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--MCGGGAGGAGGCGCCT
DCHCAGCAGGRGGCC---
 A C G T A C G T T G C A A G T C A C T G C T A G A T C G G T C A A C T G A C T G T C G A A C T G A C T G A T G C A C T G G T A C A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T