Information for 8-CRATACTGCCCCC (Motif 3)

G A T C T C G A C T G A G C A T C G T A T A G C A C G T A C T G G T A C G T A C G T A C A G T C A G T C
Reverse Opposite:
T C A G C T A G C A T G A C T G A C T G A G T C C G T A A T C G G A C T C G T A G A C T A G C T C T A G
p-value:1e-25
log p-value:-5.896e+01
Information Content per bp:1.690
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.00%
Number of Background Sequences with motif69.5
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets46.0 +/- 23.6bp
Average Position of motif in Background50.0 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.68
Offset:5
Orientation:forward strand
Alignment:CRATACTGCCCCC-
-----CTGCCCGCA
 G A T C T C G A C T G A G C A T C G T A T A G C A C G T A C T G G T A C G T A C G T A C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CRATACTGCCCCC-
-----ATGCCCACC
 G A T C T C G A C T G A G C A T C G T A T A G C A C G T A C T G G T A C G T A C G T A C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CRATACTGCCCCC-----
-GGTCCCGCCCCCTTCTC
 G A T C T C G A C T G A G C A T C G T A T A G C A C G T A C T G G T A C G T A C G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CRATACTGCCCCC-----
----TCCGCCCCCGCATT
 G A T C T C G A C T G A G C A T C G T A T A G C A C G T A C T G G T A C G T A C G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CRATACTGCCCCC-
------TGACCYCT
 G A T C T C G A C T G A G C A T C G T A T A G C A C G T A C T G G T A C G T A C G T A C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CRATACTGCCCCC-
CGACCAACTGCCATGC
 A C G T A C G T G A T C T C G A C T G A G C A T C G T A T A G C A C G T A C T G G T A C G T A C G T A C A G T C A G T C A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

Myb/MA0100.2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CRATACTGCCCCC
-CCAACTGCCA--
 G A T C T C G A C T G A G C A T C G T A T A G C A C G T A C T G G T A C G T A C G T A C A G T C A G T C
A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CRATACTGCCCCC-
-----ATGCCAACC
 G A T C T C G A C T G A G C A T C G T A T A G C A C G T A C T G G T A C G T A C G T A C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CRATACTGCCCCC-----
-NNANTTGACCCCTNNNN
 G A T C T C G A C T G A G C A T C G T A T A G C A C G T A C T G G T A C G T A C G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CRATACTGCCCCC-----
------CGCCCCCTGACA
 G A T C T C G A C T G A G C A T C G T A T A G C A C G T A C T G G T A C G T A C G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A