Information for 12-AMMAAACTYTGMT (Motif 11)

C G T A G T A C G T C A T G C A C G T A C G T A G T A C A C G T A G C T A C G T A C T G G T A C A C G T
Reverse Opposite:
C G T A A C T G A G T C G T C A C T G A C G T A A C T G A C G T A C G T A C G T C A G T C A T G A C G T
p-value:1e-8
log p-value:-2.046e+01
Information Content per bp:1.856
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif16.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets26.8 +/- 15.7bp
Average Position of motif in Background47.4 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL007.1_BREd/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AMMAAACTYTGMT
NANANAC------
 C G T A G T A C G T C A T G C A C G T A C G T A G T A C A C G T A G C T A C G T A C T G G T A C A C G T
T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AMMAAACTYTGMT
--AAATCACTGC-
 C G T A G T A C G T C A T G C A C G T A C G T A G T A C A C G T A G C T A C G T A C T G G T A C A C G T
A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AMMAAACTYTGMT
--AAATCACAGCA
 C G T A G T A C G T C A T G C A C G T A C G T A G T A C A C G T A G C T A C G T A C T G G T A C A C G T
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AMMAAACTYTGMT-----
-AATCCCTTTGATCTATC
 C G T A G T A C G T C A T G C A C G T A C G T A G T A C A C G T A G C T A C G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AMMAAACTYTGMT-----
-ATTTCCTTTGATCTATA
 C G T A G T A C G T C A T G C A C G T A C G T A G T A C A C G T A G C T A C G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Tcf7/MA0769.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AMMAAACTYTGMT----
-----CCTTTGATCTTT
 C G T A G T A C G T C A T G C A C G T A C G T A G T A C A C G T A G C T A C G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

Foxq1/MA0040.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AMMAAACTYTGMT
AATAAACAATN--
 C G T A G T A C G T C A T G C A C G T A C G T A G T A C A C G T A G C T A C G T A C T G G T A C A C G T
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AMMAAACTYTGMT-
NNNNCAACCTTCGNGA
 A C G T A C G T C G T A G T A C G T C A T G C A C G T A C G T A G T A C A C G T A G C T A C G T A C T G G T A C A C G T A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AMMAAACTYTGMT----
--AACCCTTTGATCTTT
 C G T A G T A C G T C A T G C A C G T A C G T A G T A C A C G T A G C T A C G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AMMAAACTYTGMT--
-----CCTTTGATGT
 C G T A G T A C G T C A T G C A C G T A C G T A G T A C A C G T A G C T A C G T A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T