Information for 24-WAATAAACAAMCC (Motif 27)

C G A T G T C A G C T A G C A T T G C A C G T A G T C A T A G C G T C A C T G A G T A C A G T C G T A C
Reverse Opposite:
A C T G C T A G C A T G A G C T C A G T A T C G A C G T G A C T A C G T C G T A C G A T C A G T C G T A
p-value:1e-9
log p-value:-2.108e+01
Information Content per bp:1.703
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets56.4 +/- 27.8bp
Average Position of motif in Background55.7 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxj2/MA0614.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:WAATAAACAAMCC
--GTAAACAA---
 C G A T G T C A G C T A G C A T T G C A C G T A G T C A T A G C G T C A C T G A G T A C A G T C G T A C
A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:WAATAAACAAMCC
AAACAAACATTC-
 C G A T G T C A G C T A G C A T T G C A C G T A G T C A T A G C G T C A C T G A G T A C A G T C G T A C
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---WAATAAACAAMCC-
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T C G A T G T C A G C T A G C A T T G C A C G T A G T C A T A G C G T C A C T G A G T A C A G T C G T A C A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---WAATAAACAAMCC-
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T C G A T G T C A G C T A G C A T T G C A C G T A G T C A T A G C G T C A C T G A G T A C A G T C G T A C A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

Foxq1/MA0040.1/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:WAATAAACAAMCC
-AATAAACAATN-
 C G A T G T C A G C T A G C A T T G C A C G T A G T C A T A G C G T C A C T G A G T A C A G T C G T A C
A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-WAATAAACAAMCC--
AAAGTAAACAAAAATT
 A C G T C G A T G T C A G C T A G C A T T G C A C G T A G T C A T A G C G T C A C T G A G T A C A G T C G T A C A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:WAATAAACAAMCC
AAATAAACA----
 C G A T G T C A G C T A G C A T T G C A C G T A G T C A T A G C G T C A C T G A G T A C A G T C G T A C
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:forward strand
Alignment:WAATAAACAAMCC
--GTAAACAA---
 C G A T G T C A G C T A G C A T T G C A C G T A G T C A T A G C G T C A C T G A G T A C A G T C G T A C
A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:WAATAAACAAMCC
AAGTAAACAAA--
 C G A T G T C A G C T A G C A T T G C A C G T A G T C A T A G C G T C A C T G A G T A C A G T C G T A C
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--WAATAAACAAMCC
WWATRTAAACAN---
 A C G T A C G T C G A T G T C A G C T A G C A T T G C A C G T A G T C A T A G C G T C A C T G A G T A C A G T C G T A C
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T A C G T