Information for 22-TCTTGACCAAAGT (Motif 24)

G A C T A T G C G A C T C G A T A C T G T C G A G A T C G T A C C T G A G T C A C T G A A C T G A C G T
Reverse Opposite:
T G C A T G A C G A C T A C G T A G C T A C T G C A T G A G C T T G A C C G T A C G T A T A C G C G T A
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.691
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets62.9 +/- 34.3bp
Average Position of motif in Background75.4 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCTTGACCAAAGT---
--TTGACCTANTTATN
 G A C T A T G C G A C T C G A T A C T G T C G A G A T C G T A C C T G A G T C A C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCTTGACCAAAGT
---TGACCTARTT
 G A C T A T G C G A C T C G A T A C T G T C G A G A T C G T A C C T G A G T C A C T G A A C T G A C G T
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCTTGACCAAAGT
BSNTGTTTACWYWGN-
 A C G T A C G T A C G T G A C T A T G C G A C T C G A T A C T G T C G A G A T C G T A C C T G A G T C A C T G A A C T G A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCTTGACCAAAGT
TGACCTTGACCT----
 A C G T A C G T A C G T G A C T A T G C G A C T C G A T A C T G T C G A G A T C G T A C C T G A G T C A C T G A A C T G A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCTTGACCAAAGT
CGTCTAGACA-----
 A C G T A C G T G A C T A T G C G A C T C G A T A C T G T C G A G A T C G T A C C T G A G T C A C T G A A C T G A C G T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCTTGACCAAAGT----
TATAGATCAAAGGAAAA
 G A C T A T G C G A C T C G A T A C T G T C G A G A T C G T A C C T G A G T C A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCTTGACCAAAGT----
NNNAGATCAAAGGANNN
 G A C T A T G C G A C T C G A T A C T G T C G A G A T C G T A C C T G A G T C A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCTTGACCAAAGT
CNTGTTTACATA---
 A C G T A C G T G A C T A T G C G A C T C G A T A C T G T C G A G A T C G T A C C T G A G T C A C T G A A C T G A C G T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCTTGACCAAAGT
NGNTCTAGAACCNGV-
 A C G T A C G T A C G T G A C T A T G C G A C T C G A T A C T G T C G A G A T C G T A C C T G A G T C A C T G A A C T G A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCTTGACCAAAGT
ATATTTACATA---
 A C G T G A C T A T G C G A C T C G A T A C T G T C G A G A T C G T A C C T G A G T C A C T G A A C T G A C G T
C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T A C G T A C G T