Information for 5-TAGTCGGTCT (Motif 8)

A C G T C G T A A C T G A C G T A G T C A C T G A C T G A C G T A G T C C G A T
Reverse Opposite:
C G T A C T A G C G T A A G T C A G T C A C T G G T C A A G T C A C G T G T C A
p-value:1e-8
log p-value:-1.995e+01
Information Content per bp:1.918
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets56.8 +/- 22.7bp
Average Position of motif in Background50.0 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAGTCGGTCT
CTAATCGNT--
 A C G T A C G T C G T A A C T G A C G T A G T C A C T G A C T G A C G T A G T C C G A T
G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TAGTCGGTCT--
----CTGTCTGG
 A C G T C G T A A C T G A C G T A G T C A C T G A C T G A C G T A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TAGTCGGTCT--
--VBSYGTCTGG
 A C G T C G T A A C T G A C G T A G T C A C T G A C T G A C G T A G T C C G A T A C G T A C G T
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TAGTCGGTCT--
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C T G A C T G A C G T A G T C C G A T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TAGTCGGTCT-
TATAAGTAGGTCAA
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C T G A C T G A C G T A G T C C G A T A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TAGTCGGTCT----
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C T G A C T G A C G T A G T C C G A T A C G T A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TAGTCGGTCT
CGTGGGTGGTCC
 A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C T G A C T G A C G T A G T C C G A T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

ZBTB7B/MA0694.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TAGTCGGTCT-
TTCGGTGGTCGC
 A C G T A C G T C G T A A C T G A C G T A G T C A C T G A C T G A C G T A G T C C G A T A C G T
C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TAGTCGGTCT
AAYTAGGTCA
 A C G T C G T A A C T G A C G T A G T C A C T G A C T G A C G T A G T C C G A T
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

PH0107.1_Msx2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TAGTCGGTCT--
ANCGCTAATTGGTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C T G A C T G A C G T A G T C C G A T A C G T A C G T
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C