Information for 20-KACTGKRAAWCATSAS (Motif 35)

A C T G C G T A A G T C A C G T A C T G A C T G C T A G C G T A C G T A C G T A A G T C C T G A A C G T A T C G C G T A A T C G
Reverse Opposite:
A T G C A C G T A T G C C G T A A G C T A C T G C G A T A C G T A C G T A G T C G T A C G T A C C G T A A C T G A C G T G T A C
p-value:1e-6
log p-value:-1.553e+01
Information Content per bp:1.849
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets15.7 +/- 7.6bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:KACTGKRAAWCATSAS----
NANTGGAAAAANTGAGTCAN
 A C T G C G T A A G T C A C G T A C T G A C T G C T A G C G T A C G T A C G T A A G T C C T G A A C G T A T C G C G T A A T C G A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:KACTGKRAAWCATSAS--
----GCAAAACATTACTA
 A C T G C G T A A G T C A C G T A C T G A C T G C T A G C G T A C G T A C G T A A G T C C T G A A C G T A T C G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:KACTGKRAAWCATSAS
GSCTGTCACTCA----
 A C T G C G T A A G T C A C G T A C T G A C T G C T A G C G T A C G T A C G T A A G T C C T G A A C G T A T C G C G T A A T C G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:KACTGKRAAWCATSAS
-NCTGTCAATCAN---
 A C T G C G T A A G T C A C G T A C T G A C T G C T A G C G T A C G T A C G T A A G T C C T G A A C G T A T C G C G T A A T C G
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-KACTGKRAAWCATSAS
WDNCTGGGCA-------
 A C G T A C T G C G T A A G T C A C G T A C T G A C T G C T A G C G T A C G T A C G T A A G T C C T G A A C G T A T C G C G T A A T C G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:KACTGKRAAWCATSAS
---TGGAAAA------
 A C T G C G T A A G T C A C G T A C T G A C T G C T A G C G T A C G T A C G T A A G T C C T G A A C G T A T C G C G T A A T C G
A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:KACTGKRAAWCATSAS
GYCTGGYYTNTGTCA-
 A C T G C G T A A G T C A C G T A C T G A C T G C T A G C G T A C G T A C G T A A G T C C T G A A C G T A T C G C G T A A T C G
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:KACTGKRAAWCATSAS
-SCTGTCAVTCAV---
 A C T G C G T A A G T C A C G T A C T G A C T G C T A G C G T A C G T A C G T A A G T C C T G A A C G T A T C G C G T A A T C G
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:KACTGKRAAWCATSAS
-NATGGAAAAN-----
 A C T G C G T A A G T C A C G T A C T G A C T G C T A G C G T A C G T A C G T A A G T C C T G A A C G T A T C G C G T A A T C G
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:KACTGKRAAWCATSAS
-CSTGGGAAAD-----
 A C T G C G T A A G T C A C G T A C T G A C T G C T A G C G T A C G T A C G T A A G T C C T G A A C G T A T C G C G T A A T C G
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T