Information for 10-ACCCCAGTGTGCA (Motif 28)

C G T A T G A C T A G C G T A C A G T C C G T A C T A G A G C T A C T G A C G T C T A G A G T C C T G A
Reverse Opposite:
A G C T T C A G A G T C G T C A A G T C T C G A A G T C A C G T A C T G A C T G A C T G A C T G A C G T
p-value:1e-8
log p-value:-1.915e+01
Information Content per bp:1.797
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif22.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets62.4 +/- 25.4bp
Average Position of motif in Background32.9 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ACCCCAGTGTGCA--
TGTTCCCATTGTGTACT
 A C G T A C G T C G T A T G A C T A G C G T A C A G T C C G T A C T A G A G C T A C T G A C G T C T A G A G T C C T G A A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACCCCAGTGTGCA----
-GGGCCGTGTGCAAAAA
 C G T A T G A C T A G C G T A C A G T C C G T A C T A G A G C T A C T G A C G T C T A G A G T C C T G A A C G T A C G T A C G T A C G T
A C G T C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ACCCCAGTGTGCA
--NCCATTGTTC-
 C G T A T G A C T A G C G T A C A G T C C G T A C T A G A G C T A C T G A C G T C T A G A G T C C T G A
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACCCCAGTGTGCA--
NNNCCATTGTGTNAN
 C G T A T G A C T A G C G T A C A G T C C G T A C T A G A G C T A C T G A C G T C T A G A G T C C T G A A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ACCCCAGTGTGCA
---CCTTTGTT--
 C G T A T G A C T A G C G T A C A G T C C G T A C T A G A G C T A C T G A C G T C T A G A G T C C T G A
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACCCCAGTGTGCA
-DCTCAGCAGG--
 C G T A T G A C T A G C G T A C A G T C C G T A C T A G A G C T A C T G A C G T C T A G A G T C C T G A
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ACCCCAGTGTGCA
---CCATTGTTYB
 C G T A T G A C T A G C G T A C A G T C C G T A C T A G A G C T A C T G A C G T C T A G A G T C C T G A
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACCCCAGTGTGCA
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T C G T A T G A C T A G C G T A C A G T C C G T A C T A G A G C T A C T G A C G T C T A G A G T C C T G A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

PB0026.1_Gm397_1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ACCCCAGTGTGCA-------
---CAGATGTGCACATACGT
 C G T A T G A C T A G C G T A C A G T C C G T A C T A G A G C T A C T G A C G T C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ACCCCAGTGTGCA-------
---TACATGTGCACATAAAA
 C G T A T G A C T A G C G T A C A G T C C G T A C T A G A G C T A C T G A C G T C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A