Information for 7-GCAKGGGCAAAAA (Motif 23)

A C T G A G T C C T G A C A T G A C T G A C T G A C T G A G T C G T C A C T G A C G T A C G T A C T G A
Reverse Opposite:
A G C T A C G T G A C T G A C T A C G T A C T G A G T C G T A C A G T C G T A C A G C T A C T G A G T C
p-value:1e-8
log p-value:-1.977e+01
Information Content per bp:1.820
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.8 +/- 30.5bp
Average Position of motif in Background43.1 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR4/MA0733.1/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCAKGGGCAAAAA
AANTGCGTGGGCGTNN-
 A C G T A C G T A C G T A C G T A C T G A G T C C T G A C A T G A C T G A C T G A C T G A G T C G T C A C T G A C G T A C G T A C T G A
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCAKGGGCAAAAA
-CAAGGHCANV--
 A C T G A G T C C T G A C A T G A C T G A C T G A C T G A G T C G T C A C T G A C G T A C G T A C T G A
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCAKGGGCAAAAA
ANTGCGTGGGCGTNN-
 A C G T A C G T A C G T A C T G A G T C C T G A C A T G A C T G A C T G A C T G A G T C G T C A C T G A C G T A C G T A C T G A
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCAKGGGCAAAAA
GCGCATGCGCAG---
 A C G T A C G T A C T G A G T C C T G A C A T G A C T G A C T G A C T G A G T C G T C A C T G A C G T A C G T A C T G A
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCAKGGGCAAAAA-
NNNNTTGGGCACNNCN
 A C G T A C G T A C T G A G T C C T G A C A T G A C T G A C T G A C T G A G T C G T C A C T G A C G T A C G T A C T G A A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0010.1_Egr1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCAKGGGCAAAAA
ANTGCGGGGGCGGN--
 A C G T A C G T A C G T A C T G A G T C C T G A C A T G A C T G A C T G A C T G A G T C G T C A C T G A C G T A C G T A C T G A
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCAKGGGCAAAAA
-NGTGGGCAT---
 A C T G A G T C C T G A C A T G A C T G A C T G A C T G A G T C G T C A C T G A C G T A C G T A C T G A
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCAKGGGCAAAAA
TGCGTGGGCGT---
 A C G T A C T G A G T C C T G A C A T G A C T G A C T G A C T G A G T C G T C A C T G A C G T A C G T A C T G A
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCAKGGGCAAAAA
GCGCATGCGCAC---
 A C G T A C G T A C T G A G T C C T G A C A T G A C T G A C T G A C T G A G T C G T C A C T G A C G T A C G T A C T G A
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCAKGGGCAAAAA
-TNNGGGCAG---
 A C T G A G T C C T G A C A T G A C T G A C T G A C T G A G T C G T C A C T G A C G T A C G T A C T G A
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T