Information for 13-GCATGACCWGCGGTGA (Motif 20)

A C T G A G T C C G T A A C G T A C T G C G T A G T A C A G T C G C T A A C T G A G T C C T A G A T C G C A G T A C T G C G T A
Reverse Opposite:
G A C T A G T C G C T A A T G C A G T C C T A G A G T C C G A T A C T G A C T G G A C T G T A C G T C A C G A T A C T G A G T C
p-value:1e-9
log p-value:-2.096e+01
Information Content per bp:1.728
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.6 +/- 29.2bp
Average Position of motif in Background54.4 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCATGACCWGCGGTGA--
---TNTCCTGCTGTGNNG
 A C T G A G T C C G T A A C G T A C T G C G T A G T A C A G T C G C T A A C T G A G T C C T A G A T C G C A G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCATGACCWGCGGTGA--
---NNTCCTGCTGTGNNN
 A C T G A G T C C G T A A C G T A C T G C G T A G T A C A G T C G C T A A C T G A G T C C T A G A T C G C A G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCATGACCWGCGGTGA--
---TCNCCTGCTGNGNNN
 A C T G A G T C C G T A A C G T A C T G C G T A G T A C A G T C G C T A A C T G A G T C C T A G A T C G C A G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GCATGACCWGCGGTGA
------CCTGCTGAGH
 A C T G A G T C C G T A A C G T A C T G C G T A G T A C A G T C G C T A A C T G A G T C C T A G A T C G C A G T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCATGACCWGCGGTGA
---CCCCCTGCTGTG-
 A C T G A G T C C G T A A C G T A C T G C G T A G T A C A G T C G C T A A C T G A G T C C T A G A T C G C A G T A C T G C G T A
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCATGACCWGCGGTGA
-GGCCYCCTGCTGDGH
 A C T G A G T C C G T A A C G T A C T G C G T A G T A C A G T C G C T A A C T G A G T C C T A G A T C G C A G T A C T G C G T A
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCATGACCWGCGGTGA
----BAACAGCTGT--
 A C T G A G T C C G T A A C G T A C T G C G T A G T A C A G T C G C T A A C T G A G T C C T A G A T C G C A G T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GCATGACCWGCGGTGA
------CCAGCTGTTN
 A C T G A G T C C G T A A C G T A C T G C G T A G T A C A G T C G C T A A C T G A G T C C T A G A T C G C A G T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GCATGACCWGCGGTGA
----NAHCAGCTGD--
 A C T G A G T C C G T A A C G T A C T G C G T A G T A C A G T C G C T A A C T G A G T C C T A G A T C G C A G T A C T G C G T A
A C G T A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GCATGACCWGCGGTGA
-----ANCAGCTG---
 A C T G A G T C C G T A A C G T A C T G C G T A G T A C A G T C G C T A A C T G A G T C C T A G A T C G C A G T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T