Information for 19-TGCCCACASAGGG (Motif 29)

G C A T A T C G A T G C T A G C T A G C G T C A A T G C T C G A A T G C G T C A C A T G A C T G T A C G
Reverse Opposite:
A G T C T G A C G T A C C A G T A T C G A G C T A T C G C A G T A T C G A T C G A T C G T A G C C G T A
p-value:1e-6
log p-value:-1.520e+01
Information Content per bp:1.702
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif135.0
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets46.9 +/- 23.0bp
Average Position of motif in Background49.0 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGCCCACASAGGG--------
-GCCASCAGGGGGCGCYVNNG
 G C A T A T C G A T G C T A G C T A G C G T C A A T G C T C G A A T G C G T C A C A T G A C T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCCCACASAGGG
CTGCCCGCA-----
 A C G T G C A T A T C G A T G C T A G C T A G C G T C A A T G C T C G A A T G C G T C A C A T G A C T G T A C G
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGCCCACASAGGG-
----AACAGATGGT
 G C A T A T C G A T G C T A G C T A G C G T C A A T G C T C G A A T G C G T C A C A T G A C T G T A C G A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

SRF/MA0083.3/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCCCACASAGGG---
TGACCATATATGGTCA
 G C A T A T C G A T G C T A G C T A G C G T C A A T G C T C G A A T G C G T C A C A T G A C T G T A C G A C G T A C G T A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGCCCACASAGGG
----AACAAAGG-
 G C A T A T C G A T G C T A G C T A G C G T C A A T G C T C G A A T G C G T C A C A T G A C T G T A C G
A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGCCCACASAGGG-
----AACAGATGGC
 G C A T A T C G A T G C T A G C T A G C G T C A A T G C T C G A A T G C G T C A C A T G A C T G T A C G A C G T
A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCCCACASAGGG
ATGCCCACC-----
 A C G T G C A T A T C G A T G C T A G C T A G C G T C A A T G C T C G A A T G C G T C A C A T G A C T G T A C G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGCCCACASAGGG-
----AACAKATGGY
 G C A T A T C G A T G C T A G C T A G C G T C A A T G C T C G A A T G C G T C A C A T G A C T G T A C G A C G T
A C G T A C G T A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGCCCACASAGGG--
-CCCCCCCGGGGGNN
 G C A T A T C G A T G C T A G C T A G C G T C A A T G C T C G A A T G C G T C A C A T G A C T G T A C G A C G T A C G T
A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGCCCACASAGGG-----
TGGCCACCAGGGGGCGCTA
 A C G T G C A T A T C G A T G C T A G C T A G C G T C A A T G C T C G A A T G C G T C A C A T G A C T G T A C G A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A