Information for 18-ACGGAGRTGKCCC (Motif 25)

C G T A A G T C C A T G A C T G C G T A A T C G C T G A A G C T A C T G A C G T G T A C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G G T C A A G T C C T G A A G C T A T G C A C G T A G T C G A T C A C T G A C G T
p-value:1e-7
log p-value:-1.730e+01
Information Content per bp:1.850
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.6 +/- 29.8bp
Average Position of motif in Background50.2 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACGGAGRTGKCCC---
GCGGAGGTGTCGCCTC
 C G T A A G T C C A T G A C T G C G T A A T C G C T G A A G C T A C T G A C G T G T A C A G T C A G T C A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

XBP1/MA0844.1/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ACGGAGRTGKCCC-
GATGACGTGGCANT
 C G T A A G T C C A T G A C T G C G T A A T C G C T G A A G C T A C T G A C G T G T A C A G T C A G T C A C G T
T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ACGGAGRTGKCCC------
--TGTCGTGACCCCTTAAT
 C G T A A G T C C A T G A C T G C G T A A T C G C T G A A G C T A C T G A C G T G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:ACGGAGRTGKCCC------
---NNNNTGACCCGGCGCG
 C G T A A G T C C A T G A C T G C G T A A T C G C T G A A G C T A C T G A C G T G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:ACGGAGRTGKCCC---
------CTGTTCCTGG
 C G T A A G T C C A T G A C T G C G T A A T C G C T G A A G C T A C T G A C G T G T A C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:ACGGAGRTGKCCC------
---NNCNTGACCCCGCTCT
 C G T A A G T C C A T G A C T G C G T A A T C G C T G A A G C T A C T G A C G T G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ACGGAGRTGKCCC--
AAGGCCAGATGGTCCGG
 A C G T A C G T C G T A A G T C C A T G A C T G C G T A A T C G C T G A A G C T A C T G A C G T G T A C A G T C A G T C A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:ACGGAGRTGKCCC
-------TGACCT
 C G T A A G T C C A T G A C T G C G T A A T C G C T G A A G C T A C T G A C G T G T A C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

ETV3/MA0763.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ACGGAGRTGKCCC
ACCGGAAGTG----
 A C G T C G T A A G T C C A T G A C T G C G T A A T C G C T G A A G C T A C T G A C G T G T A C A G T C A G T C
T C G A G A T C G A T C A C T G A C T G G T C A C G T A T C A G A G C T T C A G A C G T A C G T A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ACGGAGRTGKCCC
ACCGGAAGTG----
 A C G T C G T A A G T C C A T G A C T G C G T A A T C G C T G A A G C T A C T G A C G T G T A C A G T C A G T C
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T