Information for 17-CCDGCAGACCACA (Motif 24)

A G T C G T A C C A G T A C T G A G T C C T G A C T A G G T C A A G T C A G T C G C T A A G T C T G C A
Reverse Opposite:
A C G T A C T G C G A T A C T G C T A G A C G T A G T C A G C T A C T G A G T C G T C A A C T G A C T G
p-value:1e-7
log p-value:-1.783e+01
Information Content per bp:1.798
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif78.2
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets43.2 +/- 17.6bp
Average Position of motif in Background46.4 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CCDGCAGACCACA-
----NAAACCACAG
 A G T C G T A C C A G T A C T G A G T C C T G A C T A G G T C A A G T C A G T C G C T A A G T C T G C A A C G T
A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CCDGCAGACCACA---
----NWAACCACADNN
 A G T C G T A C C A G T A C T G A G T C C T G A C T A G G T C A A G T C A G T C G C T A A G T C T G C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CCDGCAGACCACA---
-----AAACCACAGAN
 A G T C G T A C C A G T A C T G A G T C C T G A C T A G G T C A A G T C A G T C G C T A A G T C T G C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CCDGCAGACCACA--
-----AAACCACANN
 A G T C G T A C C A G T A C T G A G T C C T G A C T A G G T C A A G T C A G T C G C T A A G T C T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CCDGCAGACCACA--
-----AAACCACAGC
 A G T C G T A C C A G T A C T G A G T C C T G A C T A G G T C A A G T C A G T C G C T A A G T C T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCDGCAGACCACA-----
-CATAAGACCACCATTAC
 A G T C G T A C C A G T A C T G A G T C C T G A C T A G G T C A A G T C A G T C G C T A A G T C T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCDGCAGACCACA--
-----AAACCGCAAA
 A G T C G T A C C A G T A C T G A G T C C T G A C T A G G T C A A G T C A G T C G C T A A G T C T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCDGCAGACCACA
---CCAGACRSVB
 A G T C G T A C C A G T A C T G A G T C C T G A C T A G G T C A A G T C A G T C G C T A A G T C T G C A
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CCDGCAGACCACA-
-----AAACCGCAA
 A G T C G T A C C A G T A C T G A G T C C T G A C T A G G T C A A G T C A G T C G C T A A G T C T G C A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCDGCAGACCACA
CNGTCACGCCAC-
 A G T C G T A C C A G T A C T G A G T C C T G A C T A G G T C A A G T C A G T C G C T A A G T C T G C A
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T