Information for 15-GGCAGGGCAACAA (Motif 22)

A C T G A C T G A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T C G A T A C T G C G A T A C G T C T A G A G T C A G T C A G T C A C G T A C T G A G T C A G T C
p-value:1e-8
log p-value:-1.869e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.5 +/- 20.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGGGCAACAA
TTGCCATGGCAACN-
 A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G T A
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCAGGGCAACAA
WDNCTGGGCA----
 A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGGGCAACAA
TTGCCATGGCAACC-
 A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G T A
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGCAGGGCAACAA
-SCCTAGCAACAG
 A C T G A C T G A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G T A
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Spz1/MA0111.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGCAGGGCAACAA-
---AGGGTAACAGC
 A C T G A C T G A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

Rfx1/MA0509.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGCAGGGCAACAA
GTTGCCATGGCAAC--
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G T A
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGGGCAACAA
KGTTGCCATGGCAAC--
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G T A
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GGCAGGGCAACAA
CGGTTGCCATGGCAAC--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G T A
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C A C G T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGCAGGGCAACAA----
AATAGGGTATCAATATT
 A C T G A C T G A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGCAGGGCAACAA
TGGGGAAGGGCM----
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G T A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T A C G T