Information for 8-CTCCACAAGGGCG (Motif 12)

A G T C A C G T A G T C A G T C C G T A A G T C G T C A C G T A A C T G A C T G C T A G A T G C C T A G
Reverse Opposite:
A G T C A T C G A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C T G A C T G C G T A A C T G
p-value:1e-10
log p-value:-2.330e+01
Information Content per bp:1.935
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.9 +/- 19.1bp
Average Position of motif in Background85.7 +/- 5.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTCCACAAGGGCG
ATCCAC-------
 A G T C A C G T A G T C A G T C C G T A A G T C G T C A C G T A A C T G A C T G C T A G A T G C C T A G
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTCCACAAGGGCG--------
-GCCASCAGGGGGCGCYVNNG
 A G T C A C G T A G T C A G T C C G T A A G T C G T C A C G T A A C T G A C T G C T A G A T G C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCCACAAGGGCG-----
TGGCCACCAGGGGGCGCTA
 A C G T A G T C A C G T A G T C A G T C C G T A A G T C G T C A C G T A A C T G A C T G C T A G A T G C C T A G A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTCCACAAGGGCG
---AACAAAGG--
 A G T C A C G T A G T C A G T C C G T A A G T C G T C A C G T A A C T G A C T G C T A G A T G C C T A G
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCCACAAGGGCG------
TGGCCACCAGGTGGCACTNT
 A C G T A G T C A C G T A G T C A G T C C G T A A G T C G T C A C G T A A C T G A C T G C T A G A T G C C T A G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTCCACAAGGGCG
----ACAAAG---
 A G T C A C G T A G T C A G T C C G T A A G T C G T C A C G T A A C T G A C T G C T A G A T G C C T A G
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTCCACAAGGGCG--
-----CAAGGHCANV
 A G T C A C G T A G T C A G T C C G T A A G T C G T C A C G T A A C T G A C T G C T A G A T G C C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCCACAAGGGCG---
NNTNNACAATGGGANNN
 A C G T A G T C A C G T A G T C A G T C C G T A A G T C G T C A C G T A A C T G A C T G C T A G A T G C C T A G A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCCACAAGGGCG
GTCCCCAGGGGA-
 A G T C A C G T A G T C A G T C C G T A A G T C G T C A C G T A A C T G A C T G C T A G A T G C C T A G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTCCACAAGGGCG
---RACAAWGG--
 A G T C A C G T A G T C A G T C C G T A A G T C G T C A C G T A A C T G A C T G C T A G A T G C C T A G
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T