Information for 13-CCACCTTTGT (Motif 33)

A T G C G T A C C G T A A G T C G T A C A G C T A C G T A C G T T C A G C A G T
Reverse Opposite:
G T C A A G T C T G C A T G C A T C G A C A T G T C A G G C A T C A T G T A C G
p-value:1e-1
log p-value:-2.489e+00
Information Content per bp:1.552
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif14.52%
Number of Background Sequences with motif6148.2
Percentage of Background Sequences with motif12.66%
Average Position of motif in Targets49.7 +/- 29.4bp
Average Position of motif in Background50.9 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.77
Offset:3
Orientation:forward strand
Alignment:CCACCTTTGT---
---CCTTTGTTTT
 A T G C G T A C C G T A A G T C G T A C A G C T A C G T A C G T T C A G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.76
Offset:3
Orientation:forward strand
Alignment:CCACCTTTGT---
---YCTTTGTTCC
 A T G C G T A C C G T A A G T C G T A C A G C T A C G T A C G T T C A G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.76
Offset:3
Orientation:forward strand
Alignment:CCACCTTTGT-
---CCTTTGTT
 A T G C G T A C C G T A A G T C G T A C A G C T A C G T A C G T T C A G C A G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.75
Offset:3
Orientation:forward strand
Alignment:CCACCTTTGT---
---CCWTTGTYYB
 A T G C G T A C C G T A A G T C G T A C A G C T A C G T A C G T T C A G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.74
Offset:3
Orientation:forward strand
Alignment:CCACCTTTGT-
---CCWTTGTY
 A T G C G T A C C G T A A G T C G T A C A G C T A C G T A C G T T C A G C A G T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.74
Offset:4
Orientation:forward strand
Alignment:CCACCTTTGT
----CTTTGT
 A T G C G T A C C G T A A G T C G T A C A G C T A C G T A C G T T C A G C A G T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCACCTTTGT------
TNNTCCTTTGTTCTNNT
 A C G T A T G C G T A C C G T A A G T C G T A C A G C T A C G T A C G T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCACCTTTGT------
NNNTCCTTTGTTCTNNN
 A C G T A T G C G T A C C G T A A G T C G T A C A G C T A C G T A C G T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCACCTTTGT------
ANTCCTTTGTCTNNNN
 A T G C G T A C C G T A A G T C G T A C A G C T A C G T A C G T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCACCTTTGT
AGGVNCCTTTGT
 A C G T A C G T A T G C G T A C C G T A A G T C G T A C A G C T A C G T A C G T T C A G C A G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T