Information for 10-AAATTATTTA (Motif 30)

G T C A C G T A T C G A C A G T A C G T G C T A A G C T G C A T C G A T C G T A
Reverse Opposite:
G C A T C G T A C G T A T C G A C G A T T G C A G T C A A G C T G C A T C A G T
p-value:1e-1
log p-value:-4.183e+00
Information Content per bp:1.685
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif6.22%
Number of Background Sequences with motif2122.3
Percentage of Background Sequences with motif4.37%
Average Position of motif in Targets39.9 +/- 26.4bp
Average Position of motif in Background50.0 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Lhx3/MA0135.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AAATTATTTA---
AAATTAATTAATC
 G T C A C G T A T C G A C A G T A C G T G C T A A G C T G C A T C G A T C G T A A C G T A C G T A C G T
C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

PH0149.1_Pou3f4/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AAATTATTTA----
AATTAATTAATTAATTC
 A C G T A C G T A C G T G T C A C G T A T C G A C A G T A C G T G C T A A G C T G C A T C G A T C G T A A C G T A C G T A C G T A C G T
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AAATTATTTA-----
GAAAATTAATTACTTCG
 A C G T A C G T G T C A C G T A T C G A C A G T A C G T G C T A A G C T G C A T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G

PH0147.1_Pou3f2/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AAATTATTTA-----
GATAATTAATTAGTTTG
 A C G T A C G T G T C A C G T A T C G A C A G T A C G T G C T A A G C T G C A T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
T A C G C G A T C G A T C G T A G C T A G A C T A G C T G C T A C G T A C G A T A C G T G C T A C T A G A C G T C A G T G A C T C T A G

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AAATTATTTA
-AATTATT--
 G T C A C G T A T C G A C A G T A C G T G C T A A G C T G C A T C G A T C G T A
A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T

PH0142.1_Pou1f1/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AAATTATTTA----
GATTAATTAATTAAGTC
 A C G T A C G T A C G T G T C A C G T A T C G A C A G T A C G T G C T A A G C T G C A T C G A T C G T A A C G T A C G T A C G T A C G T
C T A G T C G A C G A T C A G T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G C T A C G T A C A T G C G A T A G T C

PH0146.1_Pou3f1/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAATTATTTA----
AATTAATTAATTAATTC
 A C G T A C G T A C G T G T C A C G T A T C G A C A G T A C G T G C T A A G C T G C A T C G A T C G T A A C G T A C G T A C G T A C G T
C T G A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T C G A T G T A C

PH0071.1_Hoxc6/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AAATTATTTA------
CAAATTAATTAATAAAA
 A C G T G T C A C G T A T C G A C A G T A C G T G C T A A G C T G C A T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C T G A G C T A T C G A C A G T G A C T G C T A C G T A C G A T C G A T C T G A G T C A A C G T C G T A T C G A T G C A C G T A

PH0093.1_Lhx3/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AAATTATTTA------
GAAATTAATTAAATAAT
 A C G T G T C A C G T A T C G A C A G T A C G T G C T A A G C T G C A T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C G A T G T C A T C G A G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A C G T A C G A T G T C A G T C A A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AAATTATTTA------
NNAATTAATTAAAAANN
 A C G T G T C A C G T A T C G A C A G T A C G T G C T A A G C T G C A T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T