Information for 12-AGGCACCCTTTGA (Motif 22)

T C G A C A T G A C T G A G T C G C T A A T G C A G T C A G T C A C G T A G C T A C G T A T C G T C G A
Reverse Opposite:
A G C T A T G C G T C A C T G A C G T A T C A G C T A G T A C G C G A T T A C G G T A C G T A C A G C T
p-value:1e-6
log p-value:-1.497e+01
Information Content per bp:1.669
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif177.8
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets59.8 +/- 23.4bp
Average Position of motif in Background50.9 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:AGGCACCCTTTGA---
------CCTTTGATGT
 T C G A C A T G A C T G A G T C G C T A A T G C A G T C A G T C A C G T A G C T A C G T A T C G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AGGCACCCTTTGA---
----TNCCTTTGATGT
 T C G A C A T G A C T G A G T C G C T A A T G C A G T C A G T C A C G T A G C T A C G T A T C G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGGCACCCTTTGA------
--AATCCCTTTGATCTATC
 T C G A C A T G A C T G A G T C G C T A A T G C A G T C A G T C A C G T A G C T A C G T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGGCACCCTTTGA-----
----TNCCTTTGATCTTN
 T C G A C A T G A C T G A G T C G C T A A T G C A G T C A G T C A C G T A G C T A C G T A T C G T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:AGGCACCCTTTGA---
------CCTTTGAWGT
 T C G A C A T G A C T G A G T C G C T A A T G C A G T C A G T C A C G T A G C T A C G T A T C G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGGCACCCTTTGA------
--ATTTCCTTTGATCTATA
 T C G A C A T G A C T G A G T C G C T A A T G C A G T C A G T C A C G T A G C T A C G T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGGCACCCTTTGA------
--NNTTCCTTTGATCTANA
 T C G A C A T G A C T G A G T C G C T A A T G C A G T C A G T C A C G T A G C T A C G T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGGCACCCTTTGA-----
---AACCCTTTGATCTTT
 T C G A C A T G A C T G A G T C G C T A A T G C A G T C A G T C A C G T A G C T A C G T A T C G T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGGCACCCTTTGA------
--NNTTCCTTTGATCTNNA
 T C G A C A T G A C T G A G T C G C T A A T G C A G T C A G T C A C G T A G C T A C G T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:AGGCACCCTTTGA-----
------CCTTTGATCTTT
 T C G A C A T G A C T G A G T C G C T A A T G C A G T C A G T C A C G T A G C T A C G T A T C G T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T