Information for 6-AAAGCAAGCACCA (Motif 16)

C G T A C G T A C G T A A C T G A T G C C G T A C G T A C T A G A G T C C G T A A G T C A T G C C G T A
Reverse Opposite:
A C G T A T C G A C T G A C G T A C T G A G T C A C G T A C G T A T C G A G T C A C G T A C G T A C G T
p-value:1e-8
log p-value:-2.030e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.5 +/- 11.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAAGCAAGCACCA
AAAGTAAACA---
 C G T A C G T A C G T A A C T G A T G C C G T A C G T A C T A G A G T C C G T A A G T C A T G C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAAGCAAGCACCA
AAAGTAAACA---
 C G T A C G T A C G T A A C T G A T G C C G T A C G T A C T A G A G T C C G T A A G T C A T G C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAAGCAAGCACCA
WAAGTAAAYA---
 C G T A C G T A C G T A A C T G A T G C C G T A C G T A C T A G A G T C C G T A A G T C A T G C C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAAGCAAGCACCA-
CAAAGTAAACANNNN
 A C G T C G T A C G T A C G T A A C T G A T G C C G T A C G T A C T A G A G T C C G T A A G T C A T G C C G T A A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAAGCAAGCACCA-
--AGGAAACAGCTG
 C G T A C G T A C G T A A C T G A T G C C G T A C G T A C T A G A G T C C G T A A G T C A T G C C G T A A C G T
A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAAGCAAGCACCA
-AAATAAACA---
 C G T A C G T A C G T A A C T G A T G C C G T A C G T A C T A G A G T C C G T A A G T C A T G C C G T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AAAGCAAGCACCA
NCTAAGTAAACA---
 A C G T A C G T C G T A C G T A C G T A A C T G A T G C C G T A C G T A C T A G A G T C C G T A A G T C A T G C C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAAGCAAGCACCA-----
AADGAGVCANYASTACAGNC
 A C G T A C G T C G T A C G T A C G T A A C T G A T G C C G T A C G T A C T A G A G T C C G T A A G T C A T G C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAAGCAAGCACCA
CAAAAGTAAACAAAG
 A C G T A C G T C G T A C G T A C G T A A C T G A T G C C G T A C G T A C T A G A G T C C G T A A G T C A T G C C G T A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAAGCAAGCACCA
NWTAAYCYAATCAWN-
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G A T G C C G T A C G T A C T A G A G T C C G T A A G T C A T G C C G T A
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T A C G T