Information for 2-CCAAATACATGCT (Motif 5)

A T G C A G T C C G T A C G T A G T C A A C G T C G T A A G T C G T C A A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C T G A T C G
p-value:1e-11
log p-value:-2.737e+01
Information Content per bp:1.944
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 31.0bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCAAATACATGCT
----RTACGTGC-
 A T G C A G T C C G T A C G T A G T C A A C G T C G T A A G T C G T C A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T

PH0087.1_Irx6/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCAAATACATGCT-----
-AAAATACATGTAAAAAT
 A T G C A G T C C G T A C G T A G T C A A C G T C G T A A G T C G T C A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PH0082.1_Irx2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCAAATACATGCT-----
-TAAATACATGTAAAATT
 A T G C A G T C C G T A C G T A G T C A A C G T C G T A A G T C G T C A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCAAATACATGCT-----
-AATATACATGTAAAATT
 A T G C A G T C C G T A C G T A G T C A A C G T C G T A A G T C G T C A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

MSX2/MA0708.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCAAATACATGCT
CCAATTAA-----
 A T G C A G T C C G T A C G T A G T C A A C G T C G T A A G T C G T C A A C G T A C T G A G T C A C G T
T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T A C G T A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCAAATACATGCT-
--AAACATATGTTT
 A T G C A G T C C G T A C G T A G T C A A C G T C G T A A G T C G T C A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCAAATACATGCT
--GGGTACGTGC-
 A T G C A G T C C G T A C G T A G T C A A C G T C G T A A G T C G T C A A C G T A C T G A G T C A C G T
A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCAAATACATGCT-----
-AATATACATGTAATATA
 A T G C A G T C C G T A C G T A G T C A A C G T C G T A A G T C G T C A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

MSX1/MA0666.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCAAATACATGCT
CCAATTAG-----
 A T G C A G T C C G T A C G T A G T C A A C G T C G T A A G T C G T C A A C G T A C T G A G T C A C G T
A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CCAAATACATGCT
-----TACGTGCV
 A T G C A G T C C G T A C G T A G T C A A C G T C G T A A G T C G T C A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C