Information for 11-TTAVAAAATAAAACAA (Motif 23)

C A G T C A G T C T G A T G A C G T C A T G C A C G T A C G T A A G C T G C T A C G T A G T C A G C T A A G T C G T C A T C G A
Reverse Opposite:
A G C T C A G T C T A G C A G T A C G T G C A T C A G T T C G A C G A T C G A T A C G T C A G T A C T G G A C T G T C A G T C A
p-value:1e-7
log p-value:-1.785e+01
Information Content per bp:1.655
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.41%
Number of Background Sequences with motif148.2
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets39.4 +/- 21.5bp
Average Position of motif in Background53.5 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:forward strand
Alignment:TTAVAAAATAAAACAA----
----ATATCAAAACAAAACA
 C A G T C A G T C T G A T G A C G T C A T G C A C G T A C G T A A G C T G C T A C G T A G T C A G C T A A G T C G T C A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTAVAAAATAAAACAA
GTTAAAAAAAAAAATTA
 A C G T C A G T C A G T C T G A T G A C G T C A T G C A C G T A C G T A A G C T G C T A C G T A G T C A G C T A A G T C G T C A T C G A
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TTAVAAAATAAAACAA--
------AAACAAACATTC
 C A G T C A G T C T G A T G A C G T C A T G C A C G T A C G T A A G C T G C T A C G T A G T C A G C T A A G T C G T C A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTAVAAAATAAAACAA--
-AATGCAATAAAATTTAT
 C A G T C A G T C T G A T G A C G T C A T G C A C G T A C G T A A G C T G C T A C G T A G T C A G C T A A G T C G T C A T C G A A C G T A C G T
A C G T T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTAVAAAATAAAACAA--
---CAAAAGTAAACAAAG
 C A G T C A G T C T G A T G A C G T C A T G C A C G T A C G T A A G C T G C T A C G T A G T C A G C T A A G T C G T C A T C G A A C G T A C G T
A C G T A C G T A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TTAVAAAATAAAACAA----
-----AAAAATAACAAACGG
 C A G T C A G T C T G A T G A C G T C A T G C A C G T A C G T A A G C T G C T A C G T A G T C A G C T A A G T C G T C A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Mecom/MA0029.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTAVAAAATAAAACAA
-AAGATAAGATAACA-
 C A G T C A G T C T G A T G A C G T C A T G C A C G T A C G T A A G C T G C T A C G T A G T C A G C T A A G T C G T C A T C G A
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTAVAAAATAAAACAA----
---AACACCAAAACAAAGGA
 C A G T C A G T C T G A T G A C G T C A T G C A C G T A C G T A A G C T G C T A C G T A G T C A G C T A A G T C G T C A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.61
Offset:8
Orientation:forward strand
Alignment:TTAVAAAATAAAACAA-
--------GTAAACAAT
 C A G T C A G T C T G A T G A C G T C A T G C A C G T A C G T A A G C T G C T A C G T A G T C A G C T A A G T C G T C A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTAVAAAATAAAACAA---
-----NTTNAGAACAATTA
 C A G T C A G T C T G A T G A C G T C A T G C A C G T A C G T A A G C T G C T A C G T A G T C A G C T A A G T C G T C A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A