Information for 10-TGAATAGGAGGGT (Motif 20)

A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C A C G T A G T C A G T C A C G T C G T A A C G T A C G T A G T C C G T A
p-value:1e-8
log p-value:-1.848e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.5 +/- 27.7bp
Average Position of motif in Background45.3 +/- 5.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------TGAATAGGAGGGT
NTTNTATGAATGTGNNC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G A C T G A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGAATAGGAGGGT--
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGAATAGGAGGGT---
CTACTAGGATGTNNTN
 A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------TGAATAGGAGGGT
NNTNTCATGAATGT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G A C T G A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGAATAGGAGGGT
ATGMATATDC----
 A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G A C T G A C G T
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------TGAATAGGAGGGT
NNNTATTGAATTGNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G A C T G A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T A C G T A C G T

ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-13
Orientation:forward strand
Alignment:-------------TGAATAGGAGGGT
GGGTTTTGAAGGATGARTAGGAGTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G A C T G A C G T
C T A G C T A G A C T G A G C T G A C T A G C T A C G T C T A G G T C A C T G A A C T G T C A G C T G A A C G T C T A G G C T A C T G A A C G T C G T A C T A G A C T G C G T A A C T G A G C T A C G T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TGAATAGGAGGGT-
CATACAATACGAAATAA
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G A C T G A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

GCM2/MA0767.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TGAATAGGAGGGT-
----TATGCGGGTA
 A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TGAATAGGAGGGT
--AACAGGAAGT-
 A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G A C T G A C G T
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T