Information for 2-CAGTGAAGAT (Motif 17)

A G T C C G T A C T A G A C G T A C T G G C T A C G T A C T A G C T G A G A C T
Reverse Opposite:
C T G A G A C T A G T C C G A T C G A T G T A C C G T A A G T C C G A T C T A G
p-value:1e-8
log p-value:-1.986e+01
Information Content per bp:1.835
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.23%
Number of Background Sequences with motif101.5
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets54.1 +/- 30.5bp
Average Position of motif in Background57.6 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAGTGAAGAT
TAATTCAATGAAGTG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A C G T A C T G G C T A C G T A C T A G C T G A G A C T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGAAGAT
NNNNTGCCAGTGATTG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A C G T A C T G G C T A C G T A C T A G C T G A G A C T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGAAGAT
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A C G T A C T G G C T A C G T A C T A G C T G A G A C T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGAAGAT
GAAAGTGAAAGT
 A C G T A C G T A G T C C G T A C T A G A C G T A C T G G C T A C G T A C T A G C T G A G A C T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAGTGAAGAT
---NGAAGC-
 A G T C C G T A C T A G A C G T A C T G G C T A C G T A C T A G C T G A G A C T
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAGTGAAGAT--
AGAAAGTGAAAGTGA
 A C G T A C G T A C G T A G T C C G T A C T A G A C G T A C T G G C T A C G T A C T A G C T G A G A C T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

Mecom/MA0029.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAGTGAAGAT----
AAGATAAGATAACA
 A G T C C G T A C T A G A C G T A C T G G C T A C G T A C T A G C T G A G A C T A C G T A C G T A C G T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAGTGAAGAT
--GTGGAT--
 A G T C C G T A C T A G A C G T A C T G G C T A C G T A C T A G C T G A G A C T
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGTGAAGAT
-AGATAAGA-
 A G T C C G T A C T A G A C G T A C T G G C T A C G T A C T A G C T G A G A C T
A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGTGAAGAT-----
TAATGATGATCACTA
 A G T C C G T A C T A G A C G T A C T G G C T A C G T A C T A G C T G A G A C T A C G T A C G T A C G T A C G T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A