Information for 5-WAWTAGMATGAWT (Motif 11)

C G T A C G T A C G A T A C G T C G T A A C T G G T A C C G T A A C G T A C T G C G T A C G T A A C G T
Reverse Opposite:
C G T A C G A T C G A T A G T C C G T A A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G A T
p-value:1e-9
log p-value:-2.189e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets26.4 +/- 15.5bp
Average Position of motif in Background36.2 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F3/MA0788.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-WAWTAGMATGAWT
AAATTAGCATAAT-
 A C G T C G T A C G T A C G A T A C G T C G T A A C T G G T A C C G T A A C G T A C T G C G T A C G T A A C G T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--WAWTAGMATGAWT
BTVATTWGCATA---
 A C G T A C G T C G T A C G T A C G A T A C G T C G T A A C T G G T A C C G T A A C G T A C T G C G T A C G T A A C G T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:WAWTAGMATGAWT--
-NNTNTCATGAATGT
 C G T A C G T A C G A T A C G T C G T A A C T G G T A C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

POU3F1/MA0786.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-WAWTAGMATGAWT
TAATTTGCATAA--
 A C G T C G T A C G T A C G A T A C G T C G T A A C T G G T A C C G T A A C G T A C T G C G T A C G T A A C G T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-WAWTAGMATGAWT
TAATTTGCATAA--
 A C G T C G T A C G T A C G A T A C G T C G T A A C T G G T A C C G T A A C G T A C T G C G T A C G T A A C G T
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:WAWTAGMATGAWT---
ACTATGAATGAATGAT
 C G T A C G T A C G A T A C G T C G T A A C T G G T A C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:WAWTAGMATGAWT
AATTTGCATANT-
 C G T A C G T A C G A T A C G T C G T A A C T G G T A C C G T A A C G T A C T G C G T A C G T A A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:WAWTAGMATGAWT------
--NTTNTATGAATGTGNNC
 C G T A C G T A C G A T A C G T C G T A A C T G G T A C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--WAWTAGMATGAWT
CTCATTTGCATW---
 A C G T A C G T C G T A C G T A C G A T A C G T C G T A A C T G G T A C C G T A A C G T A C T G C G T A C G T A A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:WAWTAGMATGAWT
-ATTTGCATAA--
 C G T A C G T A C G A T A C G T C G T A A C T G G T A C C G T A A C G T A C T G C G T A C G T A A C G T
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T