p-value: | 1e-11 |
log p-value: | -2.557e+01 |
Information Content per bp: | 1.873 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.69% |
Number of Background Sequences with motif | 1.6 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 36.6 +/- 24.7bp |
Average Position of motif in Background | 35.4 +/- 11.1bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORA/MA0071.1/Jaspar
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | RCWATACAGGWYA ---ATCAAGGTCA |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | RCWATACAGGWYA -----TRAGGTCA |
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PB0106.1_Arid5a_2/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---RCWATACAGGWYA- CATACAATACGAAATAA |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | RCWATACAGGWYA ---AAYTAGGTCA |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | RCWATACAGGWYA -------AGGTCA |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | RCWATACAGGWYA ----CACAGN--- |
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Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | RCWATACAGGWYA -ANGNAAAGGTCA |
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PH0085.1_Irx4/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | RCWATACAGGWYA---- AATATACATGTAAAACA |
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ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | RCWATACAGGWYA-- -----VCAGGTRDRY |
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PB0049.1_Nr2f2_1/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | RCWATACAGGWYA---- -TCTCAAAGGTCACGAG |
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