Information for 16-GGTTATAAAC (Motif 31)

A C T G A C T G A C G T A C G T C G T A A C G T C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T C G T A A C G T C G T A C G T A A G T C A G T C
p-value:1e-5
log p-value:-1.219e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.7 +/- 33.1bp
Average Position of motif in Background62.4 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0012.1_Cdx1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGTTATAAAC---
TAAGGTAATAAAATTA
 A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PH0013.1_Cdx2/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GGTTATAAAC---
AAAGGTAATAAAATTT
 A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GGTTATAAAC--
NGYCATAAAWCH
 A C T G A C T G A C G T A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

PH0073.1_Hoxc9/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GGTTATAAAC---
GGAGGTCATTAATTAT
 A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGTTATAAAC-
GGTAATAAAAA
 A C T G A C T G A C G T A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGTTATAAAC-
-GTCATAAAAN
 A C T G A C T G A C G T A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T
A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

Foxq1/MA0040.1/Jaspar

Match Rank:7
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GGTTATAAAC----
---AATAAACAATN
 A C T G A C T G A C G T A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGTTATAAAC
-GCAATAAAA
 A C T G A C T G A C G T A C G T C G T A A C G T C G T A C G T A C G T A A G T C
A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGTTATAAAC---
-WWTRTAAACAVG
 A C T G A C T G A C G T A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

CDX2/MA0465.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGTTATAAAC
AAGCCATAAAA
 A C G T A C T G A C T G A C G T A C G T C G T A A C G T C G T A C G T A C G T A A G T C
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A