Information for 9-CTCTGCTGACWGTCAG (Motif 19)

A G T C C G A T A T G C G A C T A T C G A T G C C G A T A T C G C T G A A G T C C G T A A C T G C G A T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T T A C G C G T A A G T C C G A T A C T G A G C T A T G C C G T A A T C G A T G C C T G A A T C G C G T A C T A G
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.775
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets80.0 +/- 12.7bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTCTGCTGACWGTCAG
----SCTGTCAVTCAV
 A G T C C G A T A T G C G A C T A T C G A T G C C G A T A T C G C T G A A G T C C G T A A C T G C G A T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTCTGCTGACWGTCAG
----NCTGTCAATCAN
 A G T C C G A T A T G C G A C T A T C G A T G C C G A T A T C G C T G A A G T C C G T A A C T G C G A T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTCTGCTGACWGTCAG
---GSCTGTCACTCA-
 A G T C C G A T A T G C G A C T A T C G A T G C C G A T A T C G C T G A A G T C C G T A A C T G C G A T A G T C C G T A A C T G
A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTCTGCTGACWGTCAG
---TGCTGACTCA---
 A G T C C G A T A T G C G A C T A T C G A T G C C G A T A T C G C T G A A G T C C G T A A C T G C G A T A G T C C G T A A C T G
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CTCTGCTGACWGTCAG
------TGGCAGTTGN
 A G T C C G A T A T G C G A C T A T C G A T G C C G A T A T C G C T G A A G T C C G T A A C T G C G A T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCTGCTGACWGTCAG
-GGTGYTGACAGS---
 A G T C C G A T A T G C G A C T A T C G A T G C C G A T A T C G C T G A A G T C C G T A A C T G C G A T A G T C C G T A A C T G
A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTCTGCTGACWGTCAG
AATTTGCTGAC------
 A C G T A G T C C G A T A T G C G A C T A T C G A T G C C G A T A T C G C T G A A G T C C G T A A C T G C G A T A G T C C G T A A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CTCTGCTGACWGTCAG
------TGGCAGTTGG
 A G T C C G A T A T G C G A C T A T C G A T G C C G A T A T C G C T G A A G T C C G T A A C T G C G A T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTCTGCTGACWGTCAG
AAAATGCTGACT-----
 A C G T A G T C C G A T A T G C G A C T A T C G A T G C C G A T A T C G C T G A A G T C C G T A A C T G C G A T A G T C C G T A A C T G
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTCTGCTGACWGTCAG
----VBTGWCAGCB--
 A G T C C G A T A T G C G A C T A T C G A T G C C G A T A T C G C T G A A G T C C G T A A C T G C G A T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T