Information for 12-TCCAGTGCCTTGA (Motif 12)

A G C T A T G C G T A C C G T A A C T G A C G T T C A G G T A C A G T C A G C T G C A T T A C G C G T A
Reverse Opposite:
C G A T A T G C C G T A C T G A C T A G C A T G A G T C C G T A G T A C C G A T A C T G A T C G C T G A
p-value:1e-9
log p-value:-2.267e+01
Information Content per bp:1.725
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif100.9
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets60.9 +/- 20.4bp
Average Position of motif in Background47.8 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCCAGTGCCTTGA
--CTGTTCCTGG-
 A G C T A T G C G T A C C G T A A C T G A C G T T C A G G T A C A G T C A G C T G C A T T A C G C G T A
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TCCAGTGCCTTGA
NNNANTGCAGTGCNNTT-
 A C G T A C G T A C G T A C G T A C G T A G C T A T G C G T A C C G T A A C T G A C G T T C A G G T A C A G T C A G C T G C A T T A C G C G T A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TCCAGTGCCTTGA
AANTTCAAGTGGCTTN-
 A C G T A C G T A C G T A C G T A G C T A T G C G T A C C G T A A C T G A C G T T C A G G T A C A G T C A G C T G C A T T A C G C G T A
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCCAGTGCCTTGA-
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A G C T A T G C G T A C C G T A A C T G A C G T T C A G G T A C A G T C A G C T G C A T T A C G C G T A A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCCAGTGCCTTGA
AATTTCAAGTGGCTTN-
 A C G T A C G T A C G T A C G T A G C T A T G C G T A C C G T A A C T G A C G T T C A G G T A C A G T C A G C T G C A T T A C G C G T A
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCCAGTGCCTTGA
TTAAGTGCTT---
 A G C T A T G C G T A C C G T A A C T G A C G T T C A G G T A C A G T C A G C T G C A T T A C G C G T A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCCAGTGCCTTGA
NTCAAGTGG-----
 A C G T A G C T A T G C G T A C C G T A A C T G A C G T T C A G G T A C A G T C A G C T G C A T T A C G C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCCAGTGCCTTGA-
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A G C T A T G C G T A C C G T A A C T G A C G T T C A G G T A C A G T C A G C T G C A T T A C G C G T A A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TCCAGTGCCTTGA
NANTTTCAAGTGGTTAN-
 A C G T A C G T A C G T A C G T A C G T A G C T A T G C G T A C C G T A A C T G A C G T T C A G G T A C A G T C A G C T G C A T T A C G C G T A
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TCCAGTGCCTTGA-----
----TTTCCTAGAAAGCA
 A G C T A T G C G T A C C G T A A C T G A C G T T C A G G T A C A G T C A G C T G C A T T A C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A