Information for 2-GCTCGTCGCT (Motif 3)

A C T G A G T C C G A T A G T C A C T G A C G T A T G C A C T G A T G C A G C T
Reverse Opposite:
C T G A A T C G A G T C A T C G G T C A A G T C A C T G C G T A A C T G A G T C
p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif3.09%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.2 +/- 28.9bp
Average Position of motif in Background36.7 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mycn/MA0104.3/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCTCGTCGCT
-CACGTGGC-
 A C T G A G T C C G A T A G T C A C T G A C G T A T G C A C T G A T G C A G C T
A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCTCGTCGCT
GCACGTNC--
 A C T G A G T C C G A T A G T C A C T G A C G T A T G C A C T G A T G C A G C T
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCTCGTCGCT
-CACGTGGN-
 A C T G A G T C C G A T A G T C A C T G A C G T A T G C A C T G A T G C A G C T
A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCTCGTCGCT
GGCACGTGNC-
 A C G T A C T G A G T C C G A T A G T C A C T G A C G T A T G C A C T G A T G C A G C T
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCTCGTCGCT
GCACGTACCC
 A C T G A G T C C G A T A G T C A C T G A C G T A T G C A C T G A T G C A G C T
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCTCGTCGCT
BGCACGTA---
 A C G T A C T G A G T C C G A T A G T C A C T G A C G T A T G C A C T G A T G C A G C T
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTCGTCGCT
GGCACGTGTC-
 A C G T A C T G A G T C C G A T A G T C A C T G A C G T A T G C A C T G A T G C A G C T
A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C A C G T

MAX::MYC/MA0059.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCTCGTCGCT
GACCACGTGGT-
 A C G T A C G T A C T G A G T C C G A T A G T C A C T G A C G T A T G C A C T G A T G C A G C T
C T A G C T G A T A C G G T A C C G T A A G T C C T A G A G C T A C T G A C T G G A C T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCTCGTCGCT
CCACGTGGNN
 A C T G A G T C C G A T A G T C A C T G A C G T A T G C A C T G A T G C A G C T
T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCTCGTCGCT
CCACGTGGNN
 A C T G A G T C C G A T A G T C A C T G A C G T A T G C A C T G A T G C A G C T
T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C