Information for 7-CTMCWSCRKMCGT (Motif 13)

A G T C A C G T T G A C A G T C C G A T A T C G A G T C C T G A A C G T G T A C A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A C T G G T C A A G C T A C T G T A G C C G T A A C T G A C T G C G T A A C T G
p-value:1e-5
log p-value:-1.368e+01
Information Content per bp:1.823
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 15.7bp
Average Position of motif in Background20.0 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTMCWSCRKMCGT-----
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A G T C A C G T T G A C A G T C C G A T A T C G A G T C C T G A A C G T G T A C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTMCWSCRKMCGT--
---NCGCGGACGTTG
 A G T C A C G T T G A C A G T C C G A T A T C G A G T C C T G A A C G T G T A C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

Gmeb1/MA0615.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTMCWSCRKMCGT------
--NNNTNGTACGTAANNNN
 A G T C A C G T T G A C A G T C C G A T A T C G A G T C C T G A A C G T G T A C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

PB0027.1_Gmeb1_1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTMCWSCRKMCGT------
--NNNTNGTACGTAANNNN
 A G T C A C G T T G A C A G T C C G A T A T C G A G T C C T G A A C G T G T A C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTMCWSCRKMCGT
GGCTCYAKCAYC---
 A C G T A C G T A G T C A C G T T G A C A G T C C G A T A T C G A G T C C T G A A C G T G T A C A G T C A C T G A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CTMCWSCRKMCGT---
--------TACGTGCV
 A G T C A C G T T G A C A G T C C G A T A T C G A G T C C T G A A C G T G T A C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CTMCWSCRKMCGT--
-------GGACGTGC
 A G T C A C G T T G A C A G T C C G A T A T C G A G T C C T G A A C G T G T A C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CTMCWSCRKMCGT--
-----GGGTACGTGC
 A G T C A C G T T G A C A G T C C G A T A T C G A G T C C T G A A C G T G T A C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CTMCWSCRKMCGT--
-------RTACGTGC
 A G T C A C G T T G A C A G T C C G A T A T C G A G T C C T G A A C G T G T A C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

GMEB2/MA0862.1/Jaspar

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CTMCWSCRKMCGT--
-------TTACGTAA
 A G T C A C G T T G A C A G T C C G A T A T C G A G T C C T G A A C G T G T A C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A