Information for 18-AAGTCCGGGCAGA (Motif 21)

C T G A C G T A A C T G A C G T A T G C A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G A G T C A G T C G T A C A C T G A T C G C G T A A G T C A C G T A G C T
p-value:1e-8
log p-value:-1.864e+01
Information Content per bp:1.918
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.0 +/- 20.7bp
Average Position of motif in Background38.8 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AAGTCCGGGCAGA
---TNNGGGCAG-
 C T G A C G T A A C T G A C G T A T G C A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGTCCGGGCAGA
ACATGCCCGGGCAT-
 A C G T A C G T C T G A C G T A A C T G A C G T A T G C A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGTCCGGGCAGA
GAGSCCGAGC---
 C T G A C G T A A C T G A C G T A T G C A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAGTCCGGGCAGA
--TTCCNGGAAG-
 C T G A C G T A A C T G A C G T A T G C A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A
A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAGTCCGGGCAGA
----CTTGGCAA-
 C T G A C G T A A C T G A C G T A T G C A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AAGTCCGGGCAGA
---NGTGGGCAT-
 C T G A C G T A A C T G A C G T A T G C A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A
A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAGTCCGGGCAGA
-WDNCTGGGCA--
 C T G A C G T A A C T G A C G T A T G C A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AAGTCCGGGCAGA-
----CCAGGAACAG
 C T G A C G T A A C T G A C G T A T G C A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:AAGTCCGGGCAGA-----
--------CCAGACRSVB
 C T G A C G T A A C T G A C G T A T G C A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

GCM2/MA0767.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AAGTCCGGGCAGA
-TATGCGGGTA--
 C T G A C G T A A C T G A C G T A T G C A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A
A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T