Information for 3-ARSAMCRSAGTTC (Motif 3)

C G T A C T G A A T C G C G T A G T C A A G T C C T G A A T C G G T C A A C T G A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A G T C A C G T A T G C G A C T A C T G A C G T A C G T T A G C A G C T A C G T
p-value:1e-10
log p-value:-2.507e+01
Information Content per bp:1.847
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 32.8bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ARSAMCRSAGTTC-
CANAGNNCAAAGTCCA
 A C G T A C G T C G T A C T G A A T C G C G T A G T C A A G T C C T G A A T C G G T C A A C T G A C G T A C G T A G T C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ARSAMCRSAGTTC-
AGAGTCCAAAGTCCA
 A C G T C G T A C T G A A T C G C G T A G T C A A G T C C T G A A T C G G T C A A C T G A C G T A C G T A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ARSAMCRSAGTTC--
-----CAAAGGTCAG
 C G T A C T G A A T C G C G T A G T C A A G T C C T G A A T C G G T C A A C T G A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:4
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:ARSAMCRSAGTTC------
-------CACTTCCYCTTT
 C G T A C T G A A T C G C G T A G T C A A G T C C T G A A T C G G T C A A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-ARSAMCRSAGTTC-
AGGGAAGTCATTTCT
 A C G T C G T A C T G A A T C G C G T A G T C A A G T C C T G A A T C G G T C A A C T G A C G T A C G T A G T C A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

Tcf7/MA0769.1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ARSAMCRSAGTTC
AAAGATCAAAGG--
 A C G T C G T A C T G A A T C G C G T A G T C A A G T C C T G A A T C G G T C A A C T G A C G T A C G T A G T C
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:ARSAMCRSAGTTC-------
------NNACTTCCTCTTNN
 C G T A C T G A A T C G C G T A G T C A A G T C C T G A A T C G G T C A A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:ARSAMCRSAGTTC
NAAACCACAG---
 C G T A C T G A A T C G C G T A G T C A A G T C C T G A A T C G G T C A A C T G A C G T A C G T A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:ARSAMCRSAGTTC
NWAACCACADNN-
 C G T A C T G A A T C G C G T A G T C A A G T C C T G A A T C G G T C A A C T G A C G T A C G T A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:ARSAMCRSAGTTC--------
------AGNGTTCTAATGANN
 C G T A C T G A A T C G C G T A G T C A A G T C C T G A A T C G G T C A A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A