Information for 2-AADTGTCAATATTGAC (Motif 2)

C G T A G T C A C G T A C G A T C T A G A C G T G T A C C G T A C G T A A C G T C G T A C G A T A C G T A C T G G T C A G T A C
Reverse Opposite:
C A T G A C G T T G A C T C G A C G T A A C G T C G T A C G A T C G A T C A T G C G T A G A T C G C T A G C A T C A G T C G A T
p-value:1e-20
log p-value:-4.768e+01
Information Content per bp:1.687
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.9 +/- 14.2bp
Average Position of motif in Background54.0 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AADTGTCAATATTGAC
-TATGTAAATAT----
 C G T A G T C A C G T A C G A T C T A G A C G T G T A C C G T A C G T A A C G T C G T A C G A T A C G T A C T G G T C A G T A C
A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AADTGTCAATATTGAC
-NNTNNCAATATTAG-
 C G T A G T C A C G T A C G A T C T A G A C G T G T A C C G T A C G T A A C G T C G T A C G A T A C G T A C T G G T C A G T A C
A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AADTGTCAATATTGAC
-NNTNNCAATATTAG-
 C G T A G T C A C G T A C G A T C T A G A C G T G T A C C G T A C G T A A C G T C G T A C G A T A C G T A C T G G T C A G T A C
A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AADTGTCAATATTGAC
-TATGTAAATAT----
 C G T A G T C A C G T A C G A T C T A G A C G T G T A C C G T A C G T A A C G T C G T A C G A T A C G T A C T G G T C A G T A C
A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AADTGTCAATATTGAC
NCWRWGTAAACANSV--
 A C G T C G T A G T C A C G T A C G A T C T A G A C G T G T A C C G T A C G T A A C G T C G T A C G A T A C G T A C T G G T C A G T A C
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AADTGTCAATATTGAC
CAAAGTAAACANNNN-
 C G T A G T C A C G T A C G A T C T A G A C G T G T A C C G T A C G T A A C G T C G T A C G A T A C G T A C T G G T C A G T A C
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AADTGTCAATATTGAC
----ATGAATATTC--
 C G T A G T C A C G T A C G A T C T A G A C G T G T A C C G T A C G T A A C G T C G T A C G A T A C G T A C T G G T C A G T A C
A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AADTGTCAATATTGAC
AAAAAATCAATAAT---
 A C G T C G T A G T C A C G T A C G A T C T A G A C G T G T A C C G T A C G T A A C G T C G T A C G A T A C G T A C T G G T C A G T A C
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AADTGTCAATATTGAC
-TAAGTAAACAAA---
 C G T A G T C A C G T A C G A T C T A G A C G T G T A C C G T A C G T A A C G T C G T A C G A T A C G T A C T G G T C A G T A C
A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AADTGTCAATATTGAC
AAAAAGTAAACAAAGAC
 A C G T C G T A G T C A C G T A C G A T C T A G A C G T G T A C C G T A C G T A A C G T C G T A C G A T A C G T A C T G G T C A G T A C
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C