Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-43 | -1.005e+02 | 0.0000 | 212.0 | 24.74% | 4114.3 | 8.67% | motif file (matrix) |
svg |
2 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-41 | -9.610e+01 | 0.0000 | 157.0 | 18.32% | 2475.1 | 5.22% | motif file (matrix) |
svg |
3 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-39 | -9.014e+01 | 0.0000 | 140.0 | 16.34% | 2105.6 | 4.44% | motif file (matrix) |
svg |
4 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-34 | -7.873e+01 | 0.0000 | 117.0 | 13.65% | 1683.7 | 3.55% | motif file (matrix) |
svg |
5 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-30 | -6.940e+01 | 0.0000 | 192.0 | 22.40% | 4363.3 | 9.20% | motif file (matrix) |
svg |
6 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-27 | -6.247e+01 | 0.0000 | 178.0 | 20.77% | 4094.1 | 8.63% | motif file (matrix) |
svg |
7 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-25 | -5.888e+01 | 0.0000 | 56.0 | 6.53% | 504.4 | 1.06% | motif file (matrix) |
svg |
8 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-21 | -4.938e+01 | 0.0000 | 110.0 | 12.84% | 2149.4 | 4.53% | motif file (matrix) |
svg |
9 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-21 | -4.919e+01 | 0.0000 | 127.0 | 14.82% | 2728.7 | 5.75% | motif file (matrix) |
svg |
10 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-21 | -4.895e+01 | 0.0000 | 191.0 | 22.29% | 5145.7 | 10.85% | motif file (matrix) |
svg |
11 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-20 | -4.616e+01 | 0.0000 | 103.0 | 12.02% | 2013.3 | 4.24% | motif file (matrix) |
svg |
12 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-17 | -4.126e+01 | 0.0000 | 43.0 | 5.02% | 435.4 | 0.92% | motif file (matrix) |
svg |
13 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-17 | -4.093e+01 | 0.0000 | 108.0 | 12.60% | 2344.1 | 4.94% | motif file (matrix) |
svg |
14 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-16 | -3.866e+01 | 0.0000 | 104.0 | 12.14% | 2282.3 | 4.81% | motif file (matrix) |
svg |
15 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-15 | -3.640e+01 | 0.0000 | 59.0 | 6.88% | 913.4 | 1.93% | motif file (matrix) |
svg |
16 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-15 | -3.478e+01 | 0.0000 | 40.0 | 4.67% | 453.2 | 0.96% | motif file (matrix) |
svg |
17 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-14 | -3.260e+01 | 0.0000 | 84.0 | 9.80% | 1797.3 | 3.79% | motif file (matrix) |
svg |
18 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-12 | -2.938e+01 | 0.0000 | 42.0 | 4.90% | 589.4 | 1.24% | motif file (matrix) |
svg |
19 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-12 | -2.903e+01 | 0.0000 | 281.0 | 32.79% | 10439.5 | 22.01% | motif file (matrix) |
svg |
20 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-11 | -2.685e+01 | 0.0000 | 36.0 | 4.20% | 479.6 | 1.01% | motif file (matrix) |
svg |
21 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-11 | -2.646e+01 | 0.0000 | 277.0 | 32.32% | 10474.4 | 22.08% | motif file (matrix) |
svg |
22 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-10 | -2.497e+01 | 0.0000 | 24.0 | 2.80% | 228.4 | 0.48% | motif file (matrix) |
svg |
23 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-10 | -2.396e+01 | 0.0000 | 44.0 | 5.13% | 760.4 | 1.60% | motif file (matrix) |
svg |
24 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-10 | -2.356e+01 | 0.0000 | 124.0 | 14.47% | 3735.6 | 7.88% | motif file (matrix) |
svg |
25 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-10 | -2.318e+01 | 0.0000 | 33.0 | 3.85% | 467.1 | 0.98% | motif file (matrix) |
svg |
26 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-9 | -2.087e+01 | 0.0000 | 69.0 | 8.05% | 1702.1 | 3.59% | motif file (matrix) |
svg |
27 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-7 | -1.766e+01 | 0.0000 | 30.0 | 3.50% | 498.7 | 1.05% | motif file (matrix) |
svg |
28 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-7 | -1.725e+01 | 0.0000 | 99.0 | 11.55% | 3083.1 | 6.50% | motif file (matrix) |
svg |
29 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-7 | -1.633e+01 | 0.0000 | 42.0 | 4.90% | 918.0 | 1.94% | motif file (matrix) |
svg |
30 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.611e+01 | 0.0000 | 147.0 | 17.15% | 5285.7 | 11.14% | motif file (matrix) |
svg |
31 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-6 | -1.580e+01 | 0.0000 | 80.0 | 9.33% | 2385.2 | 5.03% | motif file (matrix) |
svg |
32 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-6 | -1.571e+01 | 0.0000 | 66.0 | 7.70% | 1829.8 | 3.86% | motif file (matrix) |
svg |
33 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-6 | -1.552e+01 | 0.0000 | 63.0 | 7.35% | 1722.9 | 3.63% | motif file (matrix) |
svg |
34 |
| PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer | 1e-6 | -1.546e+01 | 0.0000 | 32.0 | 3.73% | 615.9 | 1.30% | motif file (matrix) |
svg |
35 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-6 | -1.527e+01 | 0.0000 | 142.0 | 16.57% | 5131.9 | 10.82% | motif file (matrix) |
svg |
36 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-6 | -1.433e+01 | 0.0000 | 170.0 | 19.84% | 6529.5 | 13.77% | motif file (matrix) |
svg |
37 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.371e+01 | 0.0000 | 21.0 | 2.45% | 329.7 | 0.70% | motif file (matrix) |
svg |
38 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-5 | -1.351e+01 | 0.0000 | 14.0 | 1.63% | 154.3 | 0.33% | motif file (matrix) |
svg |
39 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-5 | -1.273e+01 | 0.0000 | 15.0 | 1.75% | 189.0 | 0.40% | motif file (matrix) |
svg |
40 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-5 | -1.257e+01 | 0.0000 | 59.0 | 6.88% | 1723.2 | 3.63% | motif file (matrix) |
svg |
41 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-5 | -1.244e+01 | 0.0000 | 51.0 | 5.95% | 1413.8 | 2.98% | motif file (matrix) |
svg |
42 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-5 | -1.224e+01 | 0.0000 | 38.0 | 4.43% | 931.3 | 1.96% | motif file (matrix) |
svg |
43 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-5 | -1.173e+01 | 0.0001 | 33.0 | 3.85% | 772.1 | 1.63% | motif file (matrix) |
svg |
44 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-4 | -1.148e+01 | 0.0001 | 56.0 | 6.53% | 1666.8 | 3.51% | motif file (matrix) |
svg |
45 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-4 | -1.095e+01 | 0.0001 | 46.0 | 5.37% | 1297.0 | 2.73% | motif file (matrix) |
svg |
46 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-4 | -1.065e+01 | 0.0002 | 65.0 | 7.58% | 2094.8 | 4.42% | motif file (matrix) |
svg |
47 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-4 | -1.063e+01 | 0.0002 | 59.0 | 6.88% | 1843.5 | 3.89% | motif file (matrix) |
svg |
48 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-4 | -1.061e+01 | 0.0002 | 91.0 | 10.62% | 3235.4 | 6.82% | motif file (matrix) |
svg |
49 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-4 | -1.058e+01 | 0.0002 | 75.0 | 8.75% | 2529.4 | 5.33% | motif file (matrix) |
svg |
50 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-4 | -1.027e+01 | 0.0003 | 70.0 | 8.17% | 2336.7 | 4.93% | motif file (matrix) |
svg |
51 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-4 | -1.015e+01 | 0.0003 | 22.0 | 2.57% | 452.0 | 0.95% | motif file (matrix) |
svg |
52 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-4 | -9.907e+00 | 0.0003 | 40.0 | 4.67% | 1116.5 | 2.35% | motif file (matrix) |
svg |
53 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-4 | -9.836e+00 | 0.0004 | 41.0 | 4.78% | 1159.5 | 2.44% | motif file (matrix) |
svg |
54 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-4 | -9.735e+00 | 0.0004 | 47.0 | 5.48% | 1405.2 | 2.96% | motif file (matrix) |
svg |
55 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-4 | -9.373e+00 | 0.0006 | 44.0 | 5.13% | 1305.2 | 2.75% | motif file (matrix) |
svg |
56 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-4 | -9.289e+00 | 0.0006 | 44.0 | 5.13% | 1310.4 | 2.76% | motif file (matrix) |
svg |
57 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-4 | -9.274e+00 | 0.0006 | 51.0 | 5.95% | 1599.3 | 3.37% | motif file (matrix) |
svg |
58 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -8.973e+00 | 0.0008 | 34.0 | 3.97% | 932.0 | 1.96% | motif file (matrix) |
svg |
59 |
| Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer | 1e-3 | -8.891e+00 | 0.0008 | 27.0 | 3.15% | 671.3 | 1.42% | motif file (matrix) |
svg |
60 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -8.890e+00 | 0.0008 | 93.0 | 10.85% | 3490.1 | 7.36% | motif file (matrix) |
svg |
61 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-3 | -8.823e+00 | 0.0009 | 107.0 | 12.49% | 4150.9 | 8.75% | motif file (matrix) |
svg |
62 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-3 | -8.807e+00 | 0.0009 | 11.0 | 1.28% | 154.1 | 0.32% | motif file (matrix) |
svg |
63 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -8.606e+00 | 0.0011 | 33.0 | 3.85% | 911.5 | 1.92% | motif file (matrix) |
svg |
64 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-3 | -8.506e+00 | 0.0012 | 59.0 | 6.88% | 1996.4 | 4.21% | motif file (matrix) |
svg |
65 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.468e+00 | 0.0012 | 53.0 | 6.18% | 1740.8 | 3.67% | motif file (matrix) |
svg |
66 |
| PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer | 1e-3 | -8.241e+00 | 0.0015 | 10.0 | 1.17% | 138.5 | 0.29% | motif file (matrix) |
svg |
67 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-3 | -8.027e+00 | 0.0018 | 62.0 | 7.23% | 2167.3 | 4.57% | motif file (matrix) |
svg |
68 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-3 | -7.979e+00 | 0.0018 | 42.0 | 4.90% | 1310.3 | 2.76% | motif file (matrix) |
svg |
69 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-3 | -7.578e+00 | 0.0027 | 16.0 | 1.87% | 334.9 | 0.71% | motif file (matrix) |
svg |
70 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-3 | -7.527e+00 | 0.0028 | 52.0 | 6.07% | 1769.1 | 3.73% | motif file (matrix) |
svg |
71 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-3 | -7.524e+00 | 0.0028 | 62.0 | 7.23% | 2211.9 | 4.66% | motif file (matrix) |
svg |
72 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-3 | -7.219e+00 | 0.0037 | 57.0 | 6.65% | 2015.1 | 4.25% | motif file (matrix) |
svg |
73 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-3 | -7.108e+00 | 0.0041 | 27.0 | 3.15% | 755.4 | 1.59% | motif file (matrix) |
svg |
74 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-2 | -6.677e+00 | 0.0062 | 61.0 | 7.12% | 2245.4 | 4.73% | motif file (matrix) |
svg |
75 |
| ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer | 1e-2 | -6.569e+00 | 0.0068 | 120.0 | 14.00% | 5064.3 | 10.68% | motif file (matrix) |
svg |
76 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.205e+00 | 0.0097 | 68.0 | 7.93% | 2616.2 | 5.52% | motif file (matrix) |
svg |
77 |
| HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer | 1e-2 | -6.050e+00 | 0.0111 | 13.0 | 1.52% | 283.3 | 0.60% | motif file (matrix) |
svg |
78 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-2 | -5.836e+00 | 0.0136 | 11.0 | 1.28% | 223.4 | 0.47% | motif file (matrix) |
svg |
79 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -5.751e+00 | 0.0147 | 46.0 | 5.37% | 1655.7 | 3.49% | motif file (matrix) |
svg |
80 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.739e+00 | 0.0147 | 48.0 | 5.60% | 1746.5 | 3.68% | motif file (matrix) |
svg |
81 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-2 | -5.728e+00 | 0.0147 | 68.0 | 7.93% | 2670.2 | 5.63% | motif file (matrix) |
svg |
82 |
| FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer | 1e-2 | -5.673e+00 | 0.0153 | 27.0 | 3.15% | 838.2 | 1.77% | motif file (matrix) |
svg |
83 |
| STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer | 1e-2 | -5.663e+00 | 0.0153 | 59.0 | 6.88% | 2257.0 | 4.76% | motif file (matrix) |
svg |
84 |
| Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.427e+00 | 0.0191 | 12.0 | 1.40% | 270.2 | 0.57% | motif file (matrix) |
svg |
85 |
| SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer | 1e-2 | -5.397e+00 | 0.0194 | 17.0 | 1.98% | 454.9 | 0.96% | motif file (matrix) |
svg |
86 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -5.391e+00 | 0.0194 | 96.0 | 11.20% | 4061.8 | 8.56% | motif file (matrix) |
svg |
87 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.371e+00 | 0.0195 | 121.0 | 14.12% | 5302.8 | 11.18% | motif file (matrix) |
svg |
88 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.325e+00 | 0.0201 | 235.0 | 27.42% | 11175.5 | 23.56% | motif file (matrix) |
svg |
89 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-2 | -4.970e+00 | 0.0284 | 31.0 | 3.62% | 1058.2 | 2.23% | motif file (matrix) |
svg |
90 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -4.779e+00 | 0.0340 | 60.0 | 7.00% | 2406.5 | 5.07% | motif file (matrix) |
svg |
91 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-2 | -4.740e+00 | 0.0350 | 108.0 | 12.60% | 4760.9 | 10.04% | motif file (matrix) |
svg |
92 |
| IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer | 1e-2 | -4.723e+00 | 0.0352 | 20.0 | 2.33% | 609.9 | 1.29% | motif file (matrix) |
svg |
93 |
| ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.644e+00 | 0.0377 | 87.0 | 10.15% | 3733.8 | 7.87% | motif file (matrix) |
svg |