Information for 4-AGTTAACTGACCY (Motif 7)

G T C A A T C G A C G T G C A T C G T A G C T A T G A C A C G T A C T G C G T A A G T C A G T C A G C T
Reverse Opposite:
C T G A A C T G C T A G G A C T T A G C C G T A A C T G C A G T G C A T C G T A T G C A T A G C A C G T
p-value:1e-14
log p-value:-3.390e+01
Information Content per bp:1.698
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.15%
Number of Background Sequences with motif198.7
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets53.9 +/- 20.0bp
Average Position of motif in Background50.5 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.75
Offset:7
Orientation:reverse strand
Alignment:AGTTAACTGACCY
-------TGACCT
 G T C A A T C G A C G T G C A T C G T A G C T A T G A C A C G T A C T G C G T A A G T C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.73
Offset:7
Orientation:reverse strand
Alignment:AGTTAACTGACCY--
-------TGACCYCT
 G T C A A T C G A C G T G C A T C G T A G C T A T G A C A C G T A C T G C G T A A G T C A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.72
Offset:7
Orientation:reverse strand
Alignment:AGTTAACTGACCY--
-------TGACCTYA
 G T C A A T C G A C G T G C A T C G T A G C T A T G A C A C G T A C T G C G T A A G T C A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGTTAACTGACCY
NAGGTCANTGACCT
 A C G T G T C A A T C G A C G T G C A T C G T A G C T A T G A C A C G T A C T G C G T A A G T C A G T C A G C T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.69
Offset:7
Orientation:reverse strand
Alignment:AGTTAACTGACCY----
-------TGACCTTGAT
 G T C A A T C G A C G T G C A T C G T A G C T A T G A C A C G T A C T G C G T A A G T C A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AGTTAACTGACCY------
---NNNNTGACCCGGCGCG
 G T C A A T C G A C G T G C A T C G T A G C T A T G A C A C G T A C T G C G T A A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:AGTTAACTGACCY---
------CTGACCTTTG
 G T C A A T C G A C G T G C A T C G T A G C T A T G A C A C G T A C T G C G T A A G T C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AGTTAACTGACCY-
---NNACTTACCTN
 G T C A A T C G A C G T G C A T C G T A G C T A T G A C A C G T A C T G C G T A A G T C A G T C A G C T A C G T
A C G T A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:AGTTAACTGACCY-
------GTGACCTT
 G T C A A T C G A C G T G C A T C G T A G C T A T G A C A C G T A C T G C G T A A G T C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.64
Offset:6
Orientation:forward strand
Alignment:AGTTAACTGACCY---
------NTGACCTTGA
 G T C A A T C G A C G T G C A T C G T A G C T A T G A C A C G T A C T G C G T A A G T C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A