Information for 13-YCTCTKGGCCCCC (Motif 19)

A G T C A G T C A G C T A G T C A C G T A C G T A C T G A C T G A G T C G A T C G T A C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C T A G A C T G A G T C A G T C G T C A G T C A A C T G C T G A C T A G C T A G
p-value:1e-8
log p-value:-1.913e+01
Information Content per bp:1.847
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif29.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets42.8 +/- 21.5bp
Average Position of motif in Background45.8 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-YCTCTKGGCCCCC
CCCCCTTGGGCCCC
 A C G T A G T C A G T C A G C T A G T C A C G T A C G T A C T G A C T G A G T C G A T C G T A C A G T C A G T C
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:YCTCTKGGCCCCC----
-NNNGGGGCGCCCCCNN
 A G T C A G T C A G C T A G T C A C G T A C G T A C T G A C T G A G T C G A T C G T A C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:YCTCTKGGCCCCC-----
--TATCGACCCCCCACAG
 A G T C A G T C A G C T A G T C A C G T A C G T A C T G A C T G A G T C G A T C G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YCTCTKGGCCCCC--
TGCCTGCGYCMCCTT
 A G T C A G T C A G C T A G T C A C G T A C G T A C T G A C T G A G T C G A T C G T A C A G T C A G T C A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:YCTCTKGGCCCCC
WDNCTGGGCA---
 A G T C A G T C A G C T A G T C A C G T A C G T A C T G A C T G A G T C G A T C G T A C A G T C A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:YCTCTKGGCCCCC
---GTGGGCCCCA
 A G T C A G T C A G C T A G T C A C G T A C G T A C T G A C T G A G T C G A T C G T A C A G T C A G T C
A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:YCTCTKGGCCCCC
---CTAGGCCT--
 A G T C A G T C A G C T A G T C A C G T A C G T A C T G A C T G A G T C G A T C G T A C A G T C A G T C
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-YCTCTKGGCCCCC
TCCCCTGGGGAC--
 A C G T A G T C A G T C A G C T A G T C A C G T A C G T A C T G A C T G A G T C G A T C G T A C A G T C A G T C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:YCTCTKGGCCCCC
---NTTGGCANN-
 A G T C A G T C A G C T A G T C A C G T A C G T A C T G A C T G A G T C G A T C G T A C A G T C A G T C
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:YCTCTKGGCCCCC------
----AAGCCCCCCAAAAAT
 A G T C A G T C A G C T A G T C A C G T A C G T A C T G A C T G A G T C G A T C G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T