Information for 6-TAATAAATTAACT (Motif 10)

A C G T C T G A C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A G T A C A G C T
Reverse Opposite:
C T G A C A T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T T G C A A C G T A G C T C G T A
p-value:1e-13
log p-value:-3.069e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 16.0bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0146.1_Pou3f1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---TAATAAATTAACT-
AATTAATTAATTAATTC
 A C G T A C G T A C G T A C G T C T G A C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A G T A C A G C T A C G T
C T G A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T C G A T G T A C

PH0132.1_Pax6/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TAATAAATTAACT---
TGATTAATTAATTGAC
 A C G T C T G A C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A G T A C A G C T A C G T A C G T A C G T
A G C T C T A G T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T A C G T T A C G C G T A G T A C

PH0149.1_Pou3f4/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TAATAAATTAACT-
AATTAATTAATTAATTC
 A C G T A C G T A C G T A C G T C T G A C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A G T A C A G C T A C G T
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C

PH0070.1_Hoxc5/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TAATAAATTAACT--
NNTNATTAATTAATTCG
 A C G T A C G T A C G T C T G A C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A G T A C A G C T A C G T A C G T
C G T A C T A G A C G T C G T A C T G A A G C T G A C T G T C A C G T A G C A T C A G T C T G A T C G A A G C T C A G T A T G C A T C G

PH0142.1_Pou1f1/Jaspar

Match Rank:5
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TAATAAATTAACT-
GATTAATTAATTAAGTC
 A C G T A C G T A C G T A C G T C T G A C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A G T A C A G C T A C G T
C T A G T C G A C G A T C A G T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G C T A C G T A C A T G C G A T A G T C

PH0095.1_Lhx5/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TAATAAATTAACT---
CGAATTAATTAAATACT
 A C G T A C G T C T G A C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A G T A C A G C T A C G T A C G T A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

PH0059.1_Hoxb4/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TAATAAATTAACT--
GNTNATTAATTAACNNG
 A C G T A C G T A C G T C T G A C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A G T A C A G C T A C G T A C G T
C T A G C A T G A C G T C G T A T C G A G A C T G A C T G T C A C G T A C G A T A C G T C T G A C T G A A G T C C A T G A G T C A T C G

PH0051.1_Hoxa4/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TAATAAATTAACT--
GATTATTAATTAACTTG
 A C G T A C G T A C G T C T G A C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A G T A C A G C T A C G T A C G T
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G

PH0173.1_Uncx/Jaspar

Match Rank:9
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TAATAAATTAACT--
CATAATTAATTAACGCG
 A C G T A C G T A C G T C T G A C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A G T A C A G C T A C G T A C G T
T G A C C T G A G C A T C T G A T G C A A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G T C T A C G T A G C A C T G

PH0154.1_Prrx1/Jaspar

Match Rank:10
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TAATAAATTAACT---
GTAACTAATTAACTACT
 A C G T A C G T C T G A C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A G T A C A G C T A C G T A C G T A C G T
T A C G A C G T G T C A T C G A A G T C G A C T T C G A C T G A A G C T A G C T C T G A T C G A A G T C C A G T C T G A T A G C A G C T