Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-371 | -8.554e+02 | 0.0000 | 344.0 | 40.33% | 754.7 | 1.62% | motif file (matrix) |
svg |
2 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-74 | -1.722e+02 | 0.0000 | 502.0 | 58.85% | 13329.0 | 28.59% | motif file (matrix) |
svg |
3 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-73 | -1.704e+02 | 0.0000 | 320.0 | 37.51% | 5952.5 | 12.77% | motif file (matrix) |
svg |
4 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-34 | -7.832e+01 | 0.0000 | 272.0 | 31.89% | 7042.4 | 15.11% | motif file (matrix) |
svg |
5 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-33 | -7.665e+01 | 0.0000 | 121.0 | 14.19% | 1812.1 | 3.89% | motif file (matrix) |
svg |
6 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-28 | -6.595e+01 | 0.0000 | 63.0 | 7.39% | 562.3 | 1.21% | motif file (matrix) |
svg |
7 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-25 | -5.851e+01 | 0.0000 | 50.0 | 5.86% | 389.0 | 0.83% | motif file (matrix) |
svg |
8 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-22 | -5.081e+01 | 0.0000 | 190.0 | 22.27% | 4959.9 | 10.64% | motif file (matrix) |
svg |
9 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-11 | -2.708e+01 | 0.0000 | 57.0 | 6.68% | 1064.8 | 2.28% | motif file (matrix) |
svg |
10 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-11 | -2.696e+01 | 0.0000 | 34.0 | 3.99% | 422.7 | 0.91% | motif file (matrix) |
svg |
11 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-11 | -2.681e+01 | 0.0000 | 48.0 | 5.63% | 800.4 | 1.72% | motif file (matrix) |
svg |
12 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-11 | -2.666e+01 | 0.0000 | 40.0 | 4.69% | 580.2 | 1.24% | motif file (matrix) |
svg |
13 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-11 | -2.622e+01 | 0.0000 | 66.0 | 7.74% | 1380.1 | 2.96% | motif file (matrix) |
svg |
14 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-11 | -2.559e+01 | 0.0000 | 58.0 | 6.80% | 1138.9 | 2.44% | motif file (matrix) |
svg |
15 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-10 | -2.403e+01 | 0.0000 | 80.0 | 9.38% | 1950.4 | 4.18% | motif file (matrix) |
svg |
16 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-9 | -2.279e+01 | 0.0000 | 57.0 | 6.68% | 1192.5 | 2.56% | motif file (matrix) |
svg |
17 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-9 | -2.198e+01 | 0.0000 | 61.0 | 7.15% | 1355.2 | 2.91% | motif file (matrix) |
svg |
18 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-8 | -1.872e+01 | 0.0000 | 26.0 | 3.05% | 361.1 | 0.77% | motif file (matrix) |
svg |
19 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.698e+01 | 0.0000 | 63.0 | 7.39% | 1631.0 | 3.50% | motif file (matrix) |
svg |
20 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-6 | -1.595e+01 | 0.0000 | 24.0 | 2.81% | 361.8 | 0.78% | motif file (matrix) |
svg |
21 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-6 | -1.579e+01 | 0.0000 | 21.0 | 2.46% | 285.0 | 0.61% | motif file (matrix) |
svg |
22 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-6 | -1.543e+01 | 0.0000 | 27.0 | 3.17% | 457.0 | 0.98% | motif file (matrix) |
svg |
23 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-5 | -1.340e+01 | 0.0000 | 48.0 | 5.63% | 1235.2 | 2.65% | motif file (matrix) |
svg |
24 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-5 | -1.280e+01 | 0.0000 | 35.0 | 4.10% | 792.0 | 1.70% | motif file (matrix) |
svg |
25 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-4 | -1.135e+01 | 0.0002 | 112.0 | 13.13% | 4069.1 | 8.73% | motif file (matrix) |
svg |
26 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-4 | -1.132e+01 | 0.0002 | 51.0 | 5.98% | 1455.6 | 3.12% | motif file (matrix) |
svg |
27 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.077e+01 | 0.0003 | 50.0 | 5.86% | 1447.7 | 3.11% | motif file (matrix) |
svg |
28 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-4 | -1.064e+01 | 0.0003 | 40.0 | 4.69% | 1065.1 | 2.28% | motif file (matrix) |
svg |
29 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-4 | -1.050e+01 | 0.0003 | 10.0 | 1.17% | 103.8 | 0.22% | motif file (matrix) |
svg |
30 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-4 | -1.003e+01 | 0.0005 | 37.0 | 4.34% | 981.6 | 2.11% | motif file (matrix) |
svg |
31 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-4 | -9.958e+00 | 0.0006 | 43.0 | 5.04% | 1216.8 | 2.61% | motif file (matrix) |
svg |
32 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-4 | -9.771e+00 | 0.0006 | 36.0 | 4.22% | 956.3 | 2.05% | motif file (matrix) |
svg |
33 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-4 | -9.453e+00 | 0.0009 | 44.0 | 5.16% | 1284.2 | 2.75% | motif file (matrix) |
svg |
34 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-4 | -9.397e+00 | 0.0009 | 8.0 | 0.94% | 75.0 | 0.16% | motif file (matrix) |
svg |
35 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-4 | -9.259e+00 | 0.0010 | 51.0 | 5.98% | 1580.7 | 3.39% | motif file (matrix) |
svg |
36 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-4 | -9.226e+00 | 0.0010 | 18.0 | 2.11% | 345.7 | 0.74% | motif file (matrix) |
svg |
37 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-3 | -9.004e+00 | 0.0012 | 23.0 | 2.70% | 517.3 | 1.11% | motif file (matrix) |
svg |
38 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-3 | -8.792e+00 | 0.0015 | 35.0 | 4.10% | 967.6 | 2.08% | motif file (matrix) |
svg |
39 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -8.403e+00 | 0.0021 | 38.0 | 4.45% | 1106.1 | 2.37% | motif file (matrix) |
svg |
40 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-3 | -8.231e+00 | 0.0024 | 25.0 | 2.93% | 618.5 | 1.33% | motif file (matrix) |
svg |
41 |
| ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer | 1e-3 | -8.190e+00 | 0.0025 | 29.0 | 3.40% | 768.0 | 1.65% | motif file (matrix) |
svg |
42 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-3 | -8.147e+00 | 0.0025 | 53.0 | 6.21% | 1742.1 | 3.74% | motif file (matrix) |
svg |
43 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-3 | -7.746e+00 | 0.0037 | 77.0 | 9.03% | 2834.9 | 6.08% | motif file (matrix) |
svg |
44 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-3 | -7.671e+00 | 0.0039 | 35.0 | 4.10% | 1029.7 | 2.21% | motif file (matrix) |
svg |
45 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-3 | -7.597e+00 | 0.0041 | 45.0 | 5.28% | 1444.7 | 3.10% | motif file (matrix) |
svg |
46 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-3 | -7.383e+00 | 0.0049 | 34.0 | 3.99% | 1006.8 | 2.16% | motif file (matrix) |
svg |
47 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.292e+00 | 0.0053 | 98.0 | 11.49% | 3854.6 | 8.27% | motif file (matrix) |
svg |
48 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-3 | -7.232e+00 | 0.0055 | 38.0 | 4.45% | 1178.5 | 2.53% | motif file (matrix) |
svg |
49 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-3 | -7.017e+00 | 0.0067 | 13.0 | 1.52% | 250.0 | 0.54% | motif file (matrix) |
svg |
50 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -6.892e+00 | 0.0074 | 36.0 | 4.22% | 1118.1 | 2.40% | motif file (matrix) |
svg |
51 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-2 | -6.839e+00 | 0.0076 | 40.0 | 4.69% | 1288.4 | 2.76% | motif file (matrix) |
svg |
52 |
| STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer | 1e-2 | -6.502e+00 | 0.0105 | 30.0 | 3.52% | 898.5 | 1.93% | motif file (matrix) |
svg |
53 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -6.498e+00 | 0.0105 | 26.0 | 3.05% | 740.0 | 1.59% | motif file (matrix) |
svg |
54 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -6.482e+00 | 0.0105 | 6.0 | 0.70% | 66.2 | 0.14% | motif file (matrix) |
svg |
55 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.406e+00 | 0.0109 | 24.0 | 2.81% | 666.7 | 1.43% | motif file (matrix) |
svg |
56 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -6.351e+00 | 0.0113 | 85.0 | 9.96% | 3358.0 | 7.20% | motif file (matrix) |
svg |
57 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-2 | -6.274e+00 | 0.0120 | 25.0 | 2.93% | 712.0 | 1.53% | motif file (matrix) |
svg |
58 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -6.188e+00 | 0.0129 | 82.0 | 9.61% | 3236.2 | 6.94% | motif file (matrix) |
svg |
59 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-2 | -6.167e+00 | 0.0129 | 101.0 | 11.84% | 4141.4 | 8.88% | motif file (matrix) |
svg |
60 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-2 | -6.110e+00 | 0.0135 | 22.0 | 2.58% | 604.3 | 1.30% | motif file (matrix) |
svg |
61 |
| Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -5.992e+00 | 0.0149 | 17.0 | 1.99% | 422.8 | 0.91% | motif file (matrix) |
svg |
62 |
| GFY(?)/Promoter/Homer | 1e-2 | -5.959e+00 | 0.0152 | 8.0 | 0.94% | 126.1 | 0.27% | motif file (matrix) |
svg |
63 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-2 | -5.943e+00 | 0.0152 | 7.0 | 0.82% | 99.9 | 0.21% | motif file (matrix) |
svg |
64 |
| STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer | 1e-2 | -5.463e+00 | 0.0241 | 27.0 | 3.17% | 841.9 | 1.81% | motif file (matrix) |
svg |
65 |
| Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer | 1e-2 | -5.456e+00 | 0.0241 | 24.0 | 2.81% | 719.2 | 1.54% | motif file (matrix) |
svg |
66 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.313e+00 | 0.0272 | 43.0 | 5.04% | 1541.6 | 3.31% | motif file (matrix) |
svg |
67 |
| PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.291e+00 | 0.0274 | 28.0 | 3.28% | 894.1 | 1.92% | motif file (matrix) |
svg |
68 |
| Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -5.262e+00 | 0.0277 | 16.0 | 1.88% | 417.6 | 0.90% | motif file (matrix) |
svg |
69 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -5.018e+00 | 0.0349 | 36.0 | 4.22% | 1259.0 | 2.70% | motif file (matrix) |
svg |
70 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-2 | -4.896e+00 | 0.0389 | 23.0 | 2.70% | 713.7 | 1.53% | motif file (matrix) |
svg |