Information for 12-GCAAACAAAC (Motif 19)

C T A G G A T C C G T A T G C A C T G A A G T C C G T A G C T A G C T A G T A C
Reverse Opposite:
A C T G C G A T C G A T A C G T T C A G G A C T A C G T A C G T C T A G G A T C
p-value:1e-7
log p-value:-1.793e+01
Information Content per bp:1.821
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif162.9
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets38.3 +/- 24.2bp
Average Position of motif in Background52.5 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---GCAAACAAAC---
AAAGTAAACAAAAATT
 A C G T A C G T A C G T C T A G G A T C C G T A T G C A C T G A A G T C C G T A G C T A G C T A G T A C A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Foxj3/MA0851.1/Jaspar

Match Rank:2
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----GCAAACAAAC--
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A C G T C T A G G A T C C G T A T G C A C T G A A G T C C G T A G C T A G C T A G T A C A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:3
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----GCAAACAAAC--
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A C G T C T A G G A T C C G T A T G C A C T G A A G T C C G T A G C T A G C T A G T A C A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GCAAACAAAC
CAAAAGTAAACAAAG
 A C G T A C G T A C G T A C G T A C G T C T A G G A T C C G T A T G C A C T G A A G T C C G T A G C T A G C T A G T A C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

Foxk1/MA0852.1/Jaspar

Match Rank:5
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GCAAACAAAC--
AAAATGTAAACAAACAG
 A C G T A C G T A C G T A C G T A C G T C T A G G A T C C G T A T G C A C T G A A G T C C G T A G C T A G C T A G T A C A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:6
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GCAAACAAAC--
AAAATGTAAACAAACAG
 A C G T A C G T A C G T A C G T A C G T C T A G G A T C C G T A T G C A C T G A A G T C C G T A G C T A G C T A G T A C A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GCAAACAAAC--
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T A C G T A C G T C T A G G A T C C G T A T G C A C T G A A G T C C G T A G C T A G C T A G T A C A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GCAAACAAAC----
--AAACAAACATTC
 C T A G G A T C C G T A T G C A C T G A A G T C C G T A G C T A G C T A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

FOXO3/MA0157.2/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCAAACAAAC
GTAAACAA--
 C T A G G A T C C G T A T G C A C T G A A G T C C G T A G C T A G C T A G T A C
C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GCAAACAAAC
AAGTAAACAAA-
 A C G T A C G T C T A G G A T C C G T A T G C A C T G A A G T C C G T A G C T A G C T A G T A C
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T