Information for 21-ATCGCGGYTA (Motif 40)

C G T A A C G T A G T C A C T G G A T C A C T G A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A C T A G A G T C A G T C C A T G A G T C A C T G C G T A A C G T
p-value:1e-4
log p-value:-1.031e+01
Information Content per bp:1.904
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.6 +/- 32.5bp
Average Position of motif in Background36.2 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATCGCGGYTA
-TTGCGGTTT
 C G T A A C G T A G T C A C T G G A T C A C T G A C T G A G T C A C G T C G T A
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATCGCGGYTA
TTTGCGGTTT
 C G T A A C G T A G T C A C T G G A T C A C T G A C T G A G T C A C G T C G T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATCGCGGYTA
TAATGGCGGNC-
 A C G T A C G T C G T A A C G T A G T C A C T G G A T C A C T G A C T G A G T C A C G T C G T A
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATCGCGGYTA----
TACCCTAGTTACCGA
 A C G T C G T A A C G T A G T C A C T G G A T C A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATCGCGGYTA
ATCAAGGTCA
 C G T A A C G T A G T C A C T G G A T C A C T G A C T G A G T C A C G T C G T A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATCGCGGYTA
CAAGATGGCGGC--
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G G A T C A C T G A C T G A G T C A C G T C G T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

PB0127.1_Gata6_2/Jaspar

Match Rank:7
Score:0.53
Offset:-8
Orientation:forward strand
Alignment:--------ATCGCGGYTA
GCGGCGATATCGCAGCG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G G A T C A C T G A C T G A G T C A C G T C G T A
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ATCGCGGYTA
NNTGTGGTTT
 C G T A A C G T A G T C A C T G G A T C A C T G A C T G A G T C A C G T C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ATCGCGGYTA-
-CTGTGGTTTN
 C G T A A C G T A G T C A C T G G A T C A C T G A C T G A G T C A C G T C G T A A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----ATCGCGGYTA-
ACCACTCTCGGTCAC
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G G A T C A C T G A C T G A G T C A C G T C G T A A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C