Information for 1-GTCACGTGAT (Motif 1)

A T C G C A G T A T G C G T C A A G T C T C A G A C G T A T C G G C T A C A G T
Reverse Opposite:
G T C A C G A T T A G C G T C A A G T C T C A G A C G T A T C G G T C A T A G C
p-value:1e-17
log p-value:-3.963e+01
Information Content per bp:1.690
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif19.11%
Number of Background Sequences with motif1190.4
Percentage of Background Sequences with motif2.51%
Average Position of motif in Targets46.0 +/- 25.8bp
Average Position of motif in Background49.3 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:1
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GTCACGTGAT
GTCACGTGAT
 A T C G C A G T A T G C G T C A A G T C T C A G A C G T A T C G G C T A C A G T
T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T

TFEB/MA0692.1/Jaspar

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GTCACGTGAT
GTCACGTGAT
 A T C G C A G T A T G C G T C A A G T C T C A G A C G T A T C G G C T A C A G T
T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:3
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GTCACGTGAT
GTCACGTGAT
 A T C G C A G T A T G C G T C A A G T C T C A G A C G T A T C G G C T A C A G T
T C A G C G A T A T G C C T G A A T G C T A C G G A C T A C T G C G T A A G C T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:4
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--GTCACGTGAT
BRGTCACGTGAC
 A C G T A C G T A T C G C A G T A T G C G T C A A G T C T C A G A C G T A T C G G C T A C A G T
A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C

MLX/MA0663.1/Jaspar

Match Rank:5
Score:0.92
Offset:0
Orientation:forward strand
Alignment:GTCACGTGAT
ATCACGTGAT
 A T C G C A G T A T G C G T C A A G T C T C A G A C G T A T C G G C T A C A G T
C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T

BHLHE41/MA0636.1/Jaspar

Match Rank:6
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:GTCACGTGAT
GTCACGTGAC
 A T C G C A G T A T G C G T C A A G T C T C A G A C G T A T C G G C T A C A G T
T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C

TFEC/MA0871.1/Jaspar

Match Rank:7
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:GTCACGTGAT
NTCACGTGAT
 A T C G C A G T A T G C G T C A A G T C T C A G A C G T A T C G G C T A C A G T
T C A G A C G T A G T C C G T A A G T C T C A G C G A T A C T G G T C A A G C T

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:GTCACGTGAT
GTCACGTGNT
 A T C G C A G T A T G C G T C A A G T C T C A G A C G T A T C G G C T A C A G T
C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

E-box(bHLH)/Promoter/Homer

Match Rank:9
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---GTCACGTGAT
CCGGTCACGTGA-
 A C G T A C G T A C G T A T C G C A G T A T G C G T C A A G T C T C A G A C G T A T C G G C T A C A G T
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T

MLXIPL/MA0664.1/Jaspar

Match Rank:10
Score:0.90
Offset:0
Orientation:forward strand
Alignment:GTCACGTGAT
ATCACGTGAT
 A T C G C A G T A T G C G T C A A G T C T C A G A C G T A T C G G C T A C A G T
C T G A C A G T A T G C C G T A T A G C T C A G A C G T A C T G G C T A G A C T