Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-313 | -7.229e+02 | 0.0000 | 296.0 | 40.66% | 800.4 | 1.71% | motif file (matrix) |
svg |
2 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-61 | -1.420e+02 | 0.0000 | 256.0 | 35.16% | 5384.0 | 11.53% | motif file (matrix) |
svg |
3 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-60 | -1.390e+02 | 0.0000 | 410.0 | 56.32% | 12709.8 | 27.21% | motif file (matrix) |
svg |
4 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-32 | -7.371e+01 | 0.0000 | 106.0 | 14.56% | 1728.1 | 3.70% | motif file (matrix) |
svg |
5 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-29 | -6.814e+01 | 0.0000 | 225.0 | 30.91% | 6674.4 | 14.29% | motif file (matrix) |
svg |
6 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-29 | -6.703e+01 | 0.0000 | 57.0 | 7.83% | 517.0 | 1.11% | motif file (matrix) |
svg |
7 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-20 | -4.777e+01 | 0.0000 | 42.0 | 5.77% | 401.1 | 0.86% | motif file (matrix) |
svg |
8 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-18 | -4.212e+01 | 0.0000 | 160.0 | 21.98% | 4952.6 | 10.60% | motif file (matrix) |
svg |
9 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-16 | -3.747e+01 | 0.0000 | 37.0 | 5.08% | 411.0 | 0.88% | motif file (matrix) |
svg |
10 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-12 | -2.985e+01 | 0.0000 | 56.0 | 7.69% | 1134.6 | 2.43% | motif file (matrix) |
svg |
11 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-12 | -2.864e+01 | 0.0000 | 28.0 | 3.85% | 312.6 | 0.67% | motif file (matrix) |
svg |
12 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-11 | -2.702e+01 | 0.0000 | 61.0 | 8.38% | 1405.2 | 3.01% | motif file (matrix) |
svg |
13 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-10 | -2.409e+01 | 0.0000 | 41.0 | 5.63% | 778.9 | 1.67% | motif file (matrix) |
svg |
14 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-9 | -2.301e+01 | 0.0000 | 57.0 | 7.83% | 1396.6 | 2.99% | motif file (matrix) |
svg |
15 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-9 | -2.172e+01 | 0.0000 | 68.0 | 9.34% | 1898.1 | 4.06% | motif file (matrix) |
svg |
16 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-9 | -2.119e+01 | 0.0000 | 51.0 | 7.01% | 1231.8 | 2.64% | motif file (matrix) |
svg |
17 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-8 | -1.972e+01 | 0.0000 | 15.0 | 2.06% | 126.0 | 0.27% | motif file (matrix) |
svg |
18 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-8 | -1.906e+01 | 0.0000 | 45.0 | 6.18% | 1078.1 | 2.31% | motif file (matrix) |
svg |
19 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-7 | -1.833e+01 | 0.0000 | 57.0 | 7.83% | 1593.7 | 3.41% | motif file (matrix) |
svg |
20 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-7 | -1.807e+01 | 0.0000 | 97.0 | 13.32% | 3433.9 | 7.35% | motif file (matrix) |
svg |
21 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-7 | -1.673e+01 | 0.0000 | 25.0 | 3.43% | 438.4 | 0.94% | motif file (matrix) |
svg |
22 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.672e+01 | 0.0000 | 58.0 | 7.97% | 1715.6 | 3.67% | motif file (matrix) |
svg |
23 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-7 | -1.670e+01 | 0.0000 | 86.0 | 11.81% | 3000.4 | 6.42% | motif file (matrix) |
svg |
24 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-6 | -1.517e+01 | 0.0000 | 95.0 | 13.05% | 3555.8 | 7.61% | motif file (matrix) |
svg |
25 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-6 | -1.459e+01 | 0.0000 | 34.0 | 4.67% | 820.3 | 1.76% | motif file (matrix) |
svg |
26 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.454e+01 | 0.0000 | 27.0 | 3.71% | 563.6 | 1.21% | motif file (matrix) |
svg |
27 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-6 | -1.436e+01 | 0.0000 | 44.0 | 6.04% | 1233.4 | 2.64% | motif file (matrix) |
svg |
28 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-6 | -1.422e+01 | 0.0000 | 45.0 | 6.18% | 1282.0 | 2.75% | motif file (matrix) |
svg |
29 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-6 | -1.393e+01 | 0.0000 | 59.0 | 8.10% | 1916.3 | 4.10% | motif file (matrix) |
svg |
30 |
| PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer | 1e-5 | -1.297e+01 | 0.0000 | 33.0 | 4.53% | 844.5 | 1.81% | motif file (matrix) |
svg |
31 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-5 | -1.235e+01 | 0.0001 | 16.0 | 2.20% | 256.6 | 0.55% | motif file (matrix) |
svg |
32 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-5 | -1.182e+01 | 0.0001 | 18.0 | 2.47% | 331.5 | 0.71% | motif file (matrix) |
svg |
33 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-4 | -1.071e+01 | 0.0002 | 19.0 | 2.61% | 395.6 | 0.85% | motif file (matrix) |
svg |
34 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-4 | -1.023e+01 | 0.0004 | 9.0 | 1.24% | 100.2 | 0.21% | motif file (matrix) |
svg |
35 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-4 | -1.020e+01 | 0.0004 | 14.0 | 1.92% | 241.6 | 0.52% | motif file (matrix) |
svg |
36 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-4 | -9.885e+00 | 0.0005 | 21.0 | 2.88% | 495.9 | 1.06% | motif file (matrix) |
svg |
37 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.377e+00 | 0.0008 | 9.0 | 1.24% | 112.4 | 0.24% | motif file (matrix) |
svg |
38 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-3 | -8.119e+00 | 0.0029 | 45.0 | 6.18% | 1656.9 | 3.55% | motif file (matrix) |
svg |
39 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -8.056e+00 | 0.0030 | 117.0 | 16.07% | 5487.1 | 11.75% | motif file (matrix) |
svg |
40 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-3 | -7.934e+00 | 0.0033 | 7.0 | 0.96% | 82.2 | 0.18% | motif file (matrix) |
svg |
41 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-3 | -7.586e+00 | 0.0045 | 19.0 | 2.61% | 506.6 | 1.08% | motif file (matrix) |
svg |
42 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -6.996e+00 | 0.0079 | 29.0 | 3.98% | 975.2 | 2.09% | motif file (matrix) |
svg |
43 |
| STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer | 1e-2 | -6.854e+00 | 0.0089 | 17.0 | 2.34% | 456.8 | 0.98% | motif file (matrix) |
svg |
44 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -6.664e+00 | 0.0106 | 211.0 | 28.98% | 11231.0 | 24.05% | motif file (matrix) |
svg |
45 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -6.588e+00 | 0.0111 | 39.0 | 5.36% | 1486.4 | 3.18% | motif file (matrix) |
svg |
46 |
| Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.176e+00 | 0.0165 | 21.0 | 2.88% | 661.8 | 1.42% | motif file (matrix) |
svg |
47 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.083e+00 | 0.0177 | 73.0 | 10.03% | 3327.3 | 7.12% | motif file (matrix) |
svg |
48 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.862e+00 | 0.0216 | 7.0 | 0.96% | 119.0 | 0.25% | motif file (matrix) |
svg |
49 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -5.685e+00 | 0.0252 | 30.0 | 4.12% | 1117.9 | 2.39% | motif file (matrix) |
svg |
50 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.561e+00 | 0.0280 | 38.0 | 5.22% | 1528.4 | 3.27% | motif file (matrix) |
svg |
51 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-2 | -5.478e+00 | 0.0298 | 43.0 | 5.91% | 1794.6 | 3.84% | motif file (matrix) |
svg |
52 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.312e+00 | 0.0345 | 27.0 | 3.71% | 1000.8 | 2.14% | motif file (matrix) |
svg |
53 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-2 | -5.306e+00 | 0.0345 | 15.0 | 2.06% | 444.1 | 0.95% | motif file (matrix) |
svg |
54 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -5.253e+00 | 0.0353 | 33.0 | 4.53% | 1303.3 | 2.79% | motif file (matrix) |
svg |
55 |
| Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer | 1e-2 | -5.184e+00 | 0.0371 | 35.0 | 4.81% | 1411.1 | 3.02% | motif file (matrix) |
svg |
56 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -4.852e+00 | 0.0508 | 41.0 | 5.63% | 1757.5 | 3.76% | motif file (matrix) |
svg |
57 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -4.817e+00 | 0.0516 | 50.0 | 6.87% | 2242.1 | 4.80% | motif file (matrix) |
svg |
58 |
| Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer | 1e-2 | -4.774e+00 | 0.0530 | 23.0 | 3.16% | 847.5 | 1.81% | motif file (matrix) |
svg |