Information for 6-GGGAACAGGGTGACCT (Motif 6)

A C T G C T A G A C T G C G T A C G T A A G T C C G T A C T A G A C T G A C T G A C G T A T C G C G T A A G T C T A G C A C G T
Reverse Opposite:
G T C A A T C G C T A G A C G T A T G C C G T A A G T C G T A C A G T C C G A T C T A G A C G T A C G T A G T C A G T C G T A C
p-value:1e-14
log p-value:-3.377e+01
Information Content per bp:1.804
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif15.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.2 +/- 23.7bp
Average Position of motif in Background48.1 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGGAACAGGGTGACCT
-AGGNCANNGTGACCT
 A C T G C T A G A C T G C G T A C G T A A G T C C G T A C T A G A C T G A C T G A C G T A T C G C G T A A G T C T A G C A C G T
A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGAACAGGGTGACCT
-TGAACCCGATGACCC
 A C T G C T A G A C T G C G T A C G T A A G T C C G T A C T A G A C T G A C T G A C G T A T C G C G T A A G T C T A G C A C G T
A C G T A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGGAACAGGGTGACCT
---AAYTAGGTCA---
 A C T G C T A G A C T G C G T A C G T A A G T C C G T A C T A G A C T G A C T G A C G T A T C G C G T A A G T C T A G C A C G T
A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.58
Offset:9
Orientation:reverse strand
Alignment:GGGAACAGGGTGACCT-
---------GTGACCTT
 A C T G C T A G A C T G C G T A C G T A A G T C C G T A C T A G A C T G A C T G A C G T A T C G C G T A A G T C T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGAACAGGGTGACCT-
-AGNACAGNCTGTTCTN
 A C T G C T A G A C T G C G T A C G T A A G T C C G T A C T A G A C T G A C T G A C G T A T C G C G T A A G T C T A G C A C G T A C G T
A C G T C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGGAACAGGGTGACCT--
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C T G C T A G A C T G C G T A C G T A A G T C C G T A C T A G A C T G A C T G A C G T A T C G C G T A A G T C T A G C A C G T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGGAACAGGGTGACCT-
--GGTCANNGTGACCTN
 A C T G C T A G A C T G C G T A C G T A A G T C C G T A C T A G A C T G A C T G A C G T A T C G C G T A A G T C T A G C A C G T A C G T
A C G T A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGGAACAGGGTGACCT
---ATCAAGGTCA---
 A C T G C T A G A C T G C G T A C G T A A G T C C G T A C T A G A C T G A C T G A C G T A T C G C G T A A G T C T A G C A C G T
A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGAACAGGGTGACCT
TWGHWACAWTGTWDC--
 A C G T A C T G C T A G A C T G C G T A C G T A A G T C C G T A C T A G A C T G A C T G A C G T A T C G C G T A A G T C T A G C A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGGAACAGGGTGACCT-
-AGNACANNNTGTNCTN
 A C T G C T A G A C T G C G T A C G T A A G T C C G T A C T A G A C T G A C T G A C G T A T C G C G T A A G T C T A G C A C G T A C G T
A C G T C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C