Information for 15-GACTGATTTA (Motif 34)

A C T G C G T A A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C T G A C G T A G T C
p-value:1e-5
log p-value:-1.222e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.7 +/- 24.3bp
Average Position of motif in Background67.1 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9/MA0485.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GACTGATTTA-----
--NTGATTTATGGCC
 A C T G C G T A A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GACTGATTTA
CNGTGATTTN
 A C T G C G T A A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:3
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GACTGATTTA-----
---TGATTTATGGCC
 A C T G C G T A A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxa9/MA0594.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GACTGATTTA----
---TGATTTATGGC
 A C T G C G T A A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:5
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GACTGATTTA-----
---TGATTTATGGCC
 A C T G C G T A A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GACTGATTTA-
-ATTGATTYND
 A C T G C G T A A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C G T
A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GACTGATTTA-----
TNNNATGATTTCNNCNN
 A C G T A C G T A C T G C G T A A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GACTGATTTA---
---TGATTGATGA
 A C T G C G T A A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

DUX4/MA0468.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GACTGATTTA
TGATTAAATTA
 A C G T A C T G C G T A A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

PB0144.1_Lef1_2/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GACTGATTTA-
NNANTGATTGATNTTN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C