Information for 2-BCTGGGTCAY (Motif 2)

A C G T A G T C G C A T T C A G C A T G A C T G A C G T A G T C C G T A G A T C
Reverse Opposite:
C T A G A C G T T C A G G T C A A G T C G T A C A G T C C G T A T C A G T G C A
p-value:1e-102
log p-value:-2.370e+02
Information Content per bp:1.648
Number of Target Sequences with motif265.0
Percentage of Target Sequences with motif36.40%
Number of Background Sequences with motif3686.0
Percentage of Background Sequences with motif7.89%
Average Position of motif in Targets49.1 +/- 27.4bp
Average Position of motif in Background50.0 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---BCTGGGTCAY---
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A G T C G C A T T C A G C A T G A C T G A C G T A G T C C G T A G A T C A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.80
Offset:3
Orientation:forward strand
Alignment:BCTGGGTCAY
---AGGTCA-
 A C G T A G T C G C A T T C A G C A T G A C T G A C G T A G T C C G T A G A T C
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-BCTGGGTCAY
ATCAAGGTCA-
 A C G T A C G T A G T C G C A T T C A G C A T G A C T G A C G T A G T C C G T A G A T C
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---BCTGGGTCAY---
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C G T A G T C G C A T T C A G C A T G A C T G A C G T A G T C C G T A G A T C A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:BCTGGGTCAY
TCAAGGTCAN
 A C G T A G T C G C A T T C A G C A T G A C T G A C G T A G T C C G T A G A T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-BCTGGGTCAY
AAYTAGGTCA-
 A C G T A C G T A G T C G C A T T C A G C A T G A C T G A C G T A G T C C G T A G A T C
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.74
Offset:0
Orientation:forward strand
Alignment:BCTGGGTCAY-
TCAAGGTCATA
 A C G T A G T C G C A T T C A G C A T G A C T G A C G T A G T C C G T A G A T C A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---BCTGGGTCAY----
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A G T C G C A T T C A G C A T G A C T G A C G T A G T C C G T A G A T C A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.73
Offset:0
Orientation:forward strand
Alignment:BCTGGGTCAY
TCAAGGTCAT
 A C G T A G T C G C A T T C A G C A T G A C T G A C G T A G T C C G T A G A T C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-BCTGGGTCAY
TTCAAGGTCAT
 A C G T A C G T A G T C G C A T T C A G C A T G A C T G A C G T A G T C C G T A G A T C
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T