p-value: | 1e-9 |
log p-value: | -2.217e+01 |
Information Content per bp: | 1.781 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.69% |
Number of Background Sequences with motif | 2.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 52.2 +/- 24.4bp |
Average Position of motif in Background | 21.2 +/- 4.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCAGRCTGCYAAA TGGCAGNCTGCCAG- |
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NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCAGRCTGCYAAA TGGCACCATGCCAA- |
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NFIA/MA0670.1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCAGRCTGCYAAA- ----GGTGCCAAGT |
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NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCAGRCTGCYAAA CTTGGCANNNTGCCAA- |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GCAGRCTGCYAAA -----TTGCCAAG |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GCAGRCTGCYAAA ----GCTGTCAA- |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCAGRCTGCYAAA -CCTGCTGAGH-- |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCAGRCTGCYAAA NNTCCTGCTGTGNNN |
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NFIX/MA0671.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCAGRCTGCYAAA ----CGTGCCAAG |
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NFIC/MA0161.1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GCAGRCTGCYAAA ------TGCCAA- |
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